Cellulosimicrobium sp. TH-20: B8281_10320
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Entry
B8281_10320 CDS
T04804
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B8281_10320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cet03400
]
B8281_10320
Enzymes [BR:
cet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B8281_10320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B8281_10320
DNA repair and recombination proteins [BR:
cet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B8281_10320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7560
HpcH_HpaI
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ARK05064
UniProt:
A0A1W6DQ50
LinkDB
All DBs
Position
2346140..2347084
Genome browser
AA seq
314 aa
AA seq
DB search
MPELPEVETVRDGLARHVVGARVVDVEVLRDYSVRRHEGGPAGFRDELLGQRLGAAVRRG
KFLWLPLEPAAGSVDGPAAALLAHLGMSGQLLVRSGVALADRSPHLRVRVVLEHDDRTAY
GAQALDFVDQRTFGHLSVQDLVPTPDGAPGGLGSDLAAVPAPVAHIGRDLLDPSLRRDDV
VDAIRRRRTGVKRALLDQTVVSGVGNIYADEALWRARLHYARATDTLRRPEAHRLLDAAA
EVMTEALAQGGTSFDALYVNVNGQSGYFSRSLAVYGQEGEPCPRCGTPVRRDEFMNRSSY
TCPRCQPRPRNGRW
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctgcccgaggtcgagaccgtccgtgacggtctcgcccgccacgtcgtgggc
gcccgcgtcgtcgacgtggaggtgctgcgcgactacagcgtgcggcgccacgagggcggg
ccggcgggcttccgcgacgagctgctcggccagaggctcggtgccgcggtgcgccgcggc
aagttcctctggctcccgctcgagcccgccgccgggtccgtcgacggccccgccgccgcc
ctgctggcccacctcgggatgtcgggccagctcctcgtccgctccggcgtcgcgctcgcc
gaccgctcgccgcacctgcgggtgcgcgtcgtgctggagcacgacgaccgcaccgcctac
ggtgcgcaggcgctcgacttcgtcgaccagcgcacgtttgggcacctgtccgtccaggac
ctcgtcccgacgcccgacggagcccccggcggcctcggttccgacctcgccgcggtcccg
gcgccggtcgcgcacatcggccgggacctgctcgacccgtcgctgcggcgcgacgacgtg
gtggacgcgatccggcgtcgtcggacgggcgtcaagcgcgcgctgctcgaccagaccgtc
gtgtccggggtcggcaacatctacgcggacgaggcgctgtggcgcgcccggctgcactac
gcccgcgcgacggacacgctgcgccgtcccgaggcgcaccgtctgctcgacgcggcggcc
gaggtcatgaccgaggccctcgcgcagggcggcacgagcttcgacgcgctgtacgtcaac
gtgaacgggcagtccggctacttctcgcggtcgctcgccgtgtacgggcaggagggcgag
ccgtgcccccggtgcggcacgcccgtccggcgcgacgagttcatgaaccgctcgtcgtac
acgtgcccgcggtgccagccgcgcccccgcaacggccgctggtag
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