Cellulosimicrobium sp. TH-20: B8281_11400
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Entry
B8281_11400 CDS
T04804
Name
(GenBank) endonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03030
DNA replication
cet03430
Mismatch repair
cet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B8281_11400
03430 Mismatch repair
B8281_11400
03440 Homologous recombination
B8281_11400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cet03032
]
B8281_11400
03400 DNA repair and recombination proteins [BR:
cet03400
]
B8281_11400
Enzymes [BR:
cet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B8281_11400
DNA replication proteins [BR:
cet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B8281_11400
DNA repair and recombination proteins [BR:
cet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B8281_11400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ARK06828
LinkDB
All DBs
Position
complement(2588871..2590727)
Genome browser
AA seq
618 aa
AA seq
DB search
MSSGPALAAPRAGSAPQGVPVQPTLEDLGTPLHEVTFVVVDLETTGGSPAGAGITEIGAV
KVRGGEVLGEFQTLVDPGVPVPAFVARLTGITSSMVATAPRIEAVLPSFLEFARGAVLVA
HNAPFDISFLKAACRAAGYDWPGNQVLDTVPLARRVVTRDEAPNHKLATLAALFRATVTP
DHRALADARATVDVLHALLGRLGPLGVTHLEDLAGATDPVPQDVRRKRHLADGLPDAPGV
YLFRGPGDEVLYVGTSTSIRRRVRSYFTRSEKRGRITEMVRIAHAVTPVVCATPLEAQVR
ELRLIAEHAPRYNRRSRHPERMTWVRLTDEAYPRLSLVRDVRAPAAHIGPFASRHQAQAA
VDALHDAFALRQCTRRLPVVASPGATACVLAEMGRCSAPCTATERDAGYGDVAAGAREAF
EGDPSRVVAELGRRIVALSRDERFEQAGELTQRLRAFLTGAARAQRLAPLAACAELVAAR
PTDAGGWEVVVVRHARLAATGVSAPGTDPWPLVHALVATGETVAPPVPPAPASHPHEAEI
LLSWLQEPGVRIVDVTGPWACPVRSAGSHVDLAATARHVARHADADGADLAHASAGPTVE
WSPDDDPSPEEPCSPPSS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggacccgccctcgccgcaccccgcgccgggtccgcaccgcagggcgtcccc
gtccagcccacgctcgaggacctcggcacgccgctgcacgaggtgacgttcgtcgtcgtc
gacctcgagacgaccggcggctcccccgccggcgccgggatcacggagatcggcgcggtg
aaggtgcgcggcggcgaggtgctcggcgagttccagacgctcgtcgaccccggggtgccc
gtccccgccttcgtcgcccggctcaccggcatcacgtcgtccatggtcgccaccgcgccc
cgcatcgaggccgtgctgcccagcttcctcgagttcgcgcgcggcgccgtgctcgtcgcg
cacaacgccccgttcgacatctcgttcctcaaggccgcgtgccgcgccgcgggctacgac
tggcccgggaaccaggtgctcgacaccgtgcccctcgcgcggcgggtcgtcacgcgcgac
gaggcgccgaaccacaagctcgcgacgctcgcggccctcttccgcgccacggtcacgccg
gaccaccgcgcgctcgccgacgcacgcgccaccgtcgacgtgctgcacgcgctcctcggc
cgcctcggcccgctcggcgtgacgcacctggaggacctcgccggggcgacggaccccgtg
ccgcaggacgtgcgccgcaagcgccacctcgccgacggcctgccggacgcgcccggcgtc
tacctcttccgcggccccggcgacgaggtgctgtacgtcggcacgtcgacgtcgatccgg
cgccgcgtgcggtcgtacttcacgcgctcggagaagcgcgggcgcatcaccgagatggtg
cgcatcgcgcacgccgtcacgcccgtcgtgtgcgcgacgccgctcgaggcgcaggtccgc
gagctgcgcctcatcgccgagcacgcgccgcggtacaaccgccggtcgcggcacccggag
cgcatgacgtgggtccggctcaccgacgaggcgtacccgcgcctctcgctggtccgcgac
gtccgcgcaccggcggcgcacatcggcccgttcgcctcgcggcaccaggcccaggccgcc
gtggacgccctgcacgacgccttcgcgctccgccagtgcacccggcgcctccccgtcgtc
gcctcgcccggcgcgacggcgtgcgtgctcgccgagatgggccgctgctccgccccgtgc
acggcgaccgagcgcgacgcgggctacggcgacgtcgcggcgggcgcgcgcgaggccttc
gagggcgacccgtcgcgcgtggtcgccgagctcgggcgccgcatcgtggcgctctcgcgc
gacgagcgcttcgagcaggccggcgagctcacccagcgcctgcgcgccttcctcacgggt
gcggcgcgtgcgcagcggctcgccccgctcgccgcgtgcgccgagctcgtcgccgcccgc
ccgacggatgccggcgggtgggaggtcgtcgtcgtgcggcacgcgcggctcgccgcgacc
ggcgtcagcgccccgggcaccgacccgtggccgctcgtgcacgcgctcgtcgcgacgggc
gaaacggtggcaccacccgtgccgccggcccccgcgagccatccgcacgaggccgagatc
ctgctgtcgtggctccaggaaccaggcgtgcggatcgtcgacgtcacgggtccctgggcg
tgcccggtccgctcggccgggtcgcacgtggacctcgcggccacggcccgccacgtcgcg
cgccacgcggacgccgacggcgccgacctggcccacgcgtcggccgggccgaccgtagag
tggtcgcctgacgacgacccgtccccggaggaaccatgctcaccgccatcgtcctga
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