Cellulosimicrobium sp. TH-20: B8281_13260
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Entry
B8281_13260 CDS
T04804
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B8281_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cet03019
]
B8281_13260
03009 Ribosome biogenesis [BR:
cet03009
]
B8281_13260
Enzymes [BR:
cet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B8281_13260
Messenger RNA biogenesis [BR:
cet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B8281_13260
Ribosome biogenesis [BR:
cet03009
]
Prokaryotic type
rRNA helicases
B8281_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
FKRP_N
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
ARK05559
UniProt:
A0A1W6DRN2
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All DBs
Position
2997193..2999094
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AA seq
633 aa
AA seq
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MTADVVAPSHALDHSTDTSPAVAEQTAPTGPVFSDLGLPAPLERAVADLGFVTPSAIQAE
AIPALLAGRDITGVAQTGTGKTAAFGLPLLAAIDPTLRRVQAVVLTPTRELAMQVADAVE
SFAAHLPKVDVVAVYGGSPYQPQQRALAAGAQVVVGTPGRVIDHIERGTLVLDDVRFLVL
DEADEMLRMGFAEDVDTIFSRAPRERQVALFSATMPAPIRRVANEHLTDPVEIAVARQSS
TVTSVRQTYAVVPFRHKTGSLVRVLATSDAEAAIVFTRTRGAAEEVGSALVERGISAATI
SGDVAQKERERIVERLRSGALDVLVATDVAARGLDVDRIGLVVNFDLPGEPEAYVHRIGR
TGRAGRTGEALSFVTPHERGRLRAIERTTRTPLQEIEIPSPADVSAHKVRALLGQVPARQ
EAGRLSMYADMVRTFLAEHDVDPVDLAAAMAALAVGDDGPRAREEQERFEAERAAAREQS
KARRTERAGERPSRGDRASGRREGDGTRGIRRDAVGTRYRLSVGHKDGVMPGGIVGALTN
EAGLAGSDVGKIDIFPSFSLVDITAPLDADTMDRISRARVAGKALRIRLDEGAPASRGPR
AGHGPSGRRDERRDRFDRADDRGERKPRHRAAF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgtcgtcgcgccctcgcacgccctcgaccactccaccgacacctccccc
gccgtcgcggagcagaccgctcccaccggccccgtgttttccgacctcggcctgcccgcg
cccctcgagcgcgccgtcgccgacctcgggttcgtcaccccgtccgcgatccaggccgag
gccatccccgcgctcctcgcgggccgcgacatcaccggcgtcgcgcagaccggcaccggc
aagaccgccgcgttcggcctcccgctgctcgccgcgatcgaccccacgctgcggcgcgtg
caggccgtcgtcctcaccccgacgcgcgagctcgcgatgcaggtcgccgacgccgtcgag
tcgttcgcggcgcacctgcccaaggtcgacgtcgtcgccgtgtacggcggctcgccctac
cagccgcagcagcgggcgctcgcggccggggcgcaggtcgtcgtcggcacgcccgggcgc
gtcatcgaccacatcgagcgcggcaccctcgtgctcgacgacgtgcgcttcctcgtgctc
gacgaggccgacgagatgctgcgcatgggcttcgcggaggacgtcgacacgatcttctcc
cgcgcgccgcgcgagcgtcaggtcgcgctgttctccgcgacgatgcccgccccgatccgc
cgcgtcgcgaacgagcacctcaccgacccggtcgagatcgccgtcgcccgccagtcctcc
acggtgacgagcgtgcgccagacgtacgccgtcgtgccgttccgccacaagaccggctcc
ctcgtgcgcgtcctcgccacgtccgacgccgaggccgcgatcgtgttcacccgcacgcgc
ggcgccgcggaggaggtcgggtccgcgctcgtcgagcgcggcatctcggccgcgaccatc
tcgggcgacgtcgcgcagaaggagcgcgagcggatcgtggagcgcctgcgctccggtgcg
ctcgacgtcctcgtcgcgaccgacgtcgccgcgcgcggcctcgacgtggaccgcatcggt
ctcgtcgtgaacttcgacctgccgggcgagcccgaggcgtacgtgcaccgcatcggccgc
accggccgcgcgggccgcaccggcgaggccctgagcttcgtcaccccgcacgagcgcggg
cgcctgcgcgcgatcgagcgcacgacccgcaccccgctgcaggagatcgagatcccctcc
cccgcggacgtgtccgcgcacaaggtgcgggccctgctcgggcaggtccccgcccgccag
gaggcaggccgcctgtcgatgtacgccgacatggtgcgcaccttcctcgccgagcacgac
gtcgacccggtcgacctcgccgcggccatggcggcgctcgcggtcggtgacgacgggccg
cgtgcccgtgaggagcaggagcggttcgaggcggagcgggccgcggcgcgcgagcagtcg
aaggcgcgtcgtacggagcgcgcgggcgagcgtccgtcgcgcggtgaccgtgcgtcgggc
cggcgcgagggcgacgggacgcgcggtatccgccgcgacgccgtcgggacgcgctaccgc
ctgtccgtggggcacaaggacggcgtgatgccgggcgggatcgtgggcgcgctgacgaac
gaggcgggtctggccgggtcggacgtcggcaagatcgacatcttcccgtcgttctcgctc
gtggacatcaccgccccgctcgacgcggacacgatggaccgcatctcgcgggcgcgggtc
gcgggcaaggcgctgcgcatccgtctcgacgagggcgcgcccgcgtcccggggcccgcgt
gccgggcacggcccgtcgggtcgtcgtgacgagcgtcgtgaccggttcgaccgtgccgac
gaccggggcgagcgcaagccgcgccaccgcgccgcgttctga
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