KEGG   Cellulosimicrobium sp. TH-20: B8281_13260
Entry
B8281_13260       CDS       T04804                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
cet  Cellulosimicrobium sp. TH-20
Pathway
cet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B8281_13260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cet03019]
    B8281_13260
   03009 Ribosome biogenesis [BR:cet03009]
    B8281_13260
Enzymes [BR:cet01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B8281_13260
Messenger RNA biogenesis [BR:cet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B8281_13260
Ribosome biogenesis [BR:cet03009]
 Prokaryotic type
  rRNA helicases
   B8281_13260
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII FKRP_N CMS1 adh_short
Other DBs
NCBI-ProteinID: ARK05559
UniProt: A0A1W6DRN2
LinkDB
Position
2997193..2999094
AA seq 633 aa
MTADVVAPSHALDHSTDTSPAVAEQTAPTGPVFSDLGLPAPLERAVADLGFVTPSAIQAE
AIPALLAGRDITGVAQTGTGKTAAFGLPLLAAIDPTLRRVQAVVLTPTRELAMQVADAVE
SFAAHLPKVDVVAVYGGSPYQPQQRALAAGAQVVVGTPGRVIDHIERGTLVLDDVRFLVL
DEADEMLRMGFAEDVDTIFSRAPRERQVALFSATMPAPIRRVANEHLTDPVEIAVARQSS
TVTSVRQTYAVVPFRHKTGSLVRVLATSDAEAAIVFTRTRGAAEEVGSALVERGISAATI
SGDVAQKERERIVERLRSGALDVLVATDVAARGLDVDRIGLVVNFDLPGEPEAYVHRIGR
TGRAGRTGEALSFVTPHERGRLRAIERTTRTPLQEIEIPSPADVSAHKVRALLGQVPARQ
EAGRLSMYADMVRTFLAEHDVDPVDLAAAMAALAVGDDGPRAREEQERFEAERAAAREQS
KARRTERAGERPSRGDRASGRREGDGTRGIRRDAVGTRYRLSVGHKDGVMPGGIVGALTN
EAGLAGSDVGKIDIFPSFSLVDITAPLDADTMDRISRARVAGKALRIRLDEGAPASRGPR
AGHGPSGRRDERRDRFDRADDRGERKPRHRAAF
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgactgctgacgtcgtcgcgccctcgcacgccctcgaccactccaccgacacctccccc
gccgtcgcggagcagaccgctcccaccggccccgtgttttccgacctcggcctgcccgcg
cccctcgagcgcgccgtcgccgacctcgggttcgtcaccccgtccgcgatccaggccgag
gccatccccgcgctcctcgcgggccgcgacatcaccggcgtcgcgcagaccggcaccggc
aagaccgccgcgttcggcctcccgctgctcgccgcgatcgaccccacgctgcggcgcgtg
caggccgtcgtcctcaccccgacgcgcgagctcgcgatgcaggtcgccgacgccgtcgag
tcgttcgcggcgcacctgcccaaggtcgacgtcgtcgccgtgtacggcggctcgccctac
cagccgcagcagcgggcgctcgcggccggggcgcaggtcgtcgtcggcacgcccgggcgc
gtcatcgaccacatcgagcgcggcaccctcgtgctcgacgacgtgcgcttcctcgtgctc
gacgaggccgacgagatgctgcgcatgggcttcgcggaggacgtcgacacgatcttctcc
cgcgcgccgcgcgagcgtcaggtcgcgctgttctccgcgacgatgcccgccccgatccgc
cgcgtcgcgaacgagcacctcaccgacccggtcgagatcgccgtcgcccgccagtcctcc
acggtgacgagcgtgcgccagacgtacgccgtcgtgccgttccgccacaagaccggctcc
ctcgtgcgcgtcctcgccacgtccgacgccgaggccgcgatcgtgttcacccgcacgcgc
ggcgccgcggaggaggtcgggtccgcgctcgtcgagcgcggcatctcggccgcgaccatc
tcgggcgacgtcgcgcagaaggagcgcgagcggatcgtggagcgcctgcgctccggtgcg
ctcgacgtcctcgtcgcgaccgacgtcgccgcgcgcggcctcgacgtggaccgcatcggt
ctcgtcgtgaacttcgacctgccgggcgagcccgaggcgtacgtgcaccgcatcggccgc
accggccgcgcgggccgcaccggcgaggccctgagcttcgtcaccccgcacgagcgcggg
cgcctgcgcgcgatcgagcgcacgacccgcaccccgctgcaggagatcgagatcccctcc
cccgcggacgtgtccgcgcacaaggtgcgggccctgctcgggcaggtccccgcccgccag
gaggcaggccgcctgtcgatgtacgccgacatggtgcgcaccttcctcgccgagcacgac
gtcgacccggtcgacctcgccgcggccatggcggcgctcgcggtcggtgacgacgggccg
cgtgcccgtgaggagcaggagcggttcgaggcggagcgggccgcggcgcgcgagcagtcg
aaggcgcgtcgtacggagcgcgcgggcgagcgtccgtcgcgcggtgaccgtgcgtcgggc
cggcgcgagggcgacgggacgcgcggtatccgccgcgacgccgtcgggacgcgctaccgc
ctgtccgtggggcacaaggacggcgtgatgccgggcgggatcgtgggcgcgctgacgaac
gaggcgggtctggccgggtcggacgtcggcaagatcgacatcttcccgtcgttctcgctc
gtggacatcaccgccccgctcgacgcggacacgatggaccgcatctcgcgggcgcgggtc
gcgggcaaggcgctgcgcatccgtctcgacgagggcgcgcccgcgtcccggggcccgcgt
gccgggcacggcccgtcgggtcgtcgtgacgagcgtcgtgaccggttcgaccgtgccgac
gaccggggcgagcgcaagccgcgccaccgcgccgcgttctga

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