Cellulosimicrobium sp. TH-20: B8281_14400
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Entry
B8281_14400 CDS
T04804
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B8281_14400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cet03019
]
B8281_14400
03400 DNA repair and recombination proteins [BR:
cet03400
]
B8281_14400
Enzymes [BR:
cet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B8281_14400
Messenger RNA biogenesis [BR:
cet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B8281_14400
DNA repair and recombination proteins [BR:
cet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B8281_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
HEM4
Motif
Other DBs
NCBI-ProteinID:
ARK06912
UniProt:
A0A1W6DV85
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All DBs
Position
3236963..3239230
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AA seq
755 aa
AA seq
DB search
MLRGLLDGQSLREDAETALRALVGRDDATLREDQWRAIEALVAFRRRALVVQRTGWGKSA
VYFVATRLLRDRGAGPTVIVSPLLALMRDQISAAARAGIKAVTINSANVTEWDDVHRAIA
DGEVDVLLCSPERLNNPGFRDEVLPRLAADAGLVVIDEAHCISDWGHDFRPDYRRIRTLL
ADLPPGIPVLATTATANERVTADVAEQLGVTAAHAAGGAVGDAAGGAAHEDVLVLRGGLD
RESLHLAVLRLPDQPTRVAWLVEALQDVDGSGIVYCLTVSAAEQVASQLRAAGLAVASYT
GQTDPAERERLEEDLKENRVKALVATSALGMGFDKPDLAFVVHLGAPSSPIAYYQQVGRA
GRGVDSAVVVLLPGEEDRRIWEWFASTAFPPQDQVRATLDALGAGGTQSVAQLETQVDLK
RSRLEGMLKVLDVDGAVRRVKGGWEATGEPWTYDAERYARVDATRSAEQQAMLDYEATDG
CRMAFLRAALDDPELEDGWRCGRCDTCGGVTLPALPDAEAVAAARADMDRPGVEVVARRQ
WPSGMDRLGLDLRGRLGADELAETGRAVARLDGLGWSAPLRELFAATTPDGDTPVALRRA
AARVLDDWAELYESAPQPDLGTGADDDTPDGTAPAERRLLVDGVVAVRSATRPRLTFHLA
NGLASYLGKPLIGAVGPAPGREEPGRHDVNSATRLAGVAGRLQLELSDAARAGLAGRRVL
LVDDYTESGWTLTVAARLLRRAGAAAVHPFVLGVR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcggcctcctcgacgggcagtcgctgcgcgaggacgccgagaccgcgctgcgc
gccctcgtggggcgcgacgacgcgacgctgcgcgaggaccagtggcgcgcgatcgaggcg
ctcgtggcgttccgccgtcgtgcgctcgtcgtgcagcgcaccgggtggggcaagtcggcc
gtgtacttcgtggcgacccggctgctgcgggaccgcggcgccggcccgacggtgatcgtg
tccccgctcctcgcgctcatgcgcgaccagatctcggccgccgcacgcgccgggatcaag
gcggtgacgatcaactctgcgaacgtcaccgagtgggacgacgtccaccgcgcgatcgcg
gacggcgaggtggacgtcctcctgtgctcgccggagcggctcaacaaccccggcttccgc
gacgaggtcctcccccggctcgcggccgacgcgggcctcgtcgtcatcgacgaggcgcac
tgcatctcggactggggccacgacttccggccggactaccggcgcatccgcaccctgctc
gccgacctgccgcccggcatcccggtgctcgcgacgaccgcgacggcgaacgagcgcgtg
accgccgacgtcgcggagcagctcggcgtcacggcggcgcacgccgcgggcggggccgtc
ggcgacgccgcgggcggtgcggcccacgaggacgtcctggtcctgcgcggcggcctggac
cgcgagtcgctgcacctcgccgtgctgcgcctgcccgaccagccgacgcgcgtcgcgtgg
ctcgtcgaggcgctccaggacgtcgacggctcggggatcgtgtactgcctcaccgtctcc
gccgccgagcaggtcgcgagccagctccgcgccgccggtctcgccgtggcgtcgtacacg
ggccagacggaccccgccgagcgcgagcggctcgaggaggacctcaaggagaaccgtgtc
aaggcgctcgtcgcgacctccgcgctcgggatgggcttcgacaagccggacctggccttc
gtcgtccacctcggggcgccgagctcgcccatcgcgtactaccagcaggtcgggcgcgcg
ggccgtggcgtggactcggccgtcgtggtgctcctgccgggcgaggaggaccgccgcatc
tgggagtggttcgcgtccaccgcgttcccgccccaggaccaggtgcgggcgaccctcgac
gccctcggcgcgggcggcacgcagtccgtcgcgcagctcgagacgcaggtcgacctcaag
cggtcacgcctcgagggcatgctcaaggtgctcgacgtcgacggcgcggtccggcgcgtc
aagggcggctgggaggcgacgggcgagccctggacgtacgacgccgagcgctatgcgcgc
gtcgacgccacgcgctcggccgagcagcaggcgatgctcgactacgaggccaccgacggg
tgccgcatggcgttcctgcgcgccgcgctcgacgacccggagctcgaggacgggtggcgg
tgcggccgttgcgacacgtgcggcggcgtgacgctgcccgcgctccccgacgcggaggcc
gtcgccgccgcgcgcgccgacatggaccgccccggcgtcgaggtcgtggcccgtcggcag
tggccgagcggtatggaccgcctggggctcgacctgcgcgggcgcctgggtgcggacgag
ctcgcggagaccgggcgcgcggtcgcgcgcctcgacgggctcggctggtccgcgccgctg
cgcgagctcttcgcggccacgacgcccgacggcgacacccccgtcgcgctccggcgcgcc
gccgcgcgcgtcctcgacgactgggcggagctctacgagtccgccccgcagccggacctg
gggaccggggccgacgacgacacccccgacggcaccgcgccggccgagcggcggctcctc
gtggacggcgtcgtcgcggtccgctccgcgacgcgtccgcggctcacgttccacctggcg
aacgggctcgcgagctacctcggcaagccgctcatcggcgcggtcgggccggccccgggc
cgcgaggagccgggccggcacgacgtgaactccgcgacgcgcctcgcgggcgtcgcgggc
cgcctccagctcgagctgtcggacgcggcgcgcgcgggtctcgccggtcgccgcgtgctg
ctcgtcgacgactacaccgagtcgggctggaccctcacggtcgcggcgcgcctgctgcgc
cgcgccggggcggcggcggtgcacccgttcgtgctcggggtgcgctga
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