Cellulosimicrobium sp. TH-20: B8281_14425
Help
Entry
B8281_14425 CDS
T04804
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03030
DNA replication
cet03430
Mismatch repair
cet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B8281_14425
03430 Mismatch repair
B8281_14425
03440 Homologous recombination
B8281_14425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cet03032
]
B8281_14425
03400 DNA repair and recombination proteins [BR:
cet03400
]
B8281_14425
Enzymes [BR:
cet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B8281_14425
DNA replication proteins [BR:
cet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B8281_14425
DNA repair and recombination proteins [BR:
cet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B8281_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ARK05745
UniProt:
A0A1W6DS66
LinkDB
All DBs
Position
complement(3242196..3245732)
Genome browser
AA seq
1178 aa
AA seq
DB search
MPTATEDFVHLHVHTEYSMLDGAARIGDLFDEVERLGQKAIATTDHGYVFGAFEFWSRAQ
AKGIKPIIGVEAYVTPGTSRFDQTRVRFGQQGQESDDVSARGAYTHMTLLAKDNEGLHNL
FRASSLASLEGQMGKWPRMDRDLLQRYGKGLVATSGCPSGEIQTRLRLGQWDEAVRTAGE
LQDIFGRENFFVELMDHGIDIETRVTKDLLRLAETIGARLVATNDLHYVREEDASSQEAL
LAINSGSTLDDPDRFKFDGTGYYVKSAAEMRRVFAELPEACDNTLLIAEQCEVSFNTKAN
YMPRFPVPEGEDETSWFVKEVERGLHRRYPNGIPDAARKQAQYETEVIIQMGFPGYFLVV
ADFINWAKDQGIRVGPGRGSAAGSMASYLMGITELDPLEHGLIFERFLNPERVSMPDVDV
DFDERRRGEVIRYVTEKYGDDRVAQIVTYGTIKAKQALKDSARLLGFPFAMGEKLTKAMP
PAVMGKDIPLSGIFDPKHERYSEAAEFRQLHDTDPEAQRVVELARGIEGLKRQWGVHAAG
VIMSSDPLIDIIPIMRRPQDGAVITQFDYPTSEGLGLIKMDFLGLRNLTILDDALENIEM
NGKEPIEIESLTLDDKASYELLARGDTLGVFQLDGGPMRALLRQMKPDKFDDLSAVIALY
RPGPMGMNSHTNYALRKNGLQKIEPIHPELEQPLAEILDETYGLIVYQEQVQRAAQILAG
YSLGQADLLRRAMGKKKKEILDKEFVPFQAGCRERGYSDAAIQAVWDTLVPFAGYAFNKA
HSAGYGLVAYWTAFLKANYPTEYMAALLQSVRDDKDKLALYLNECRRMHITVLPPDVNDS
AAKFTAVGGDIRFGLTGVRNVGANVVDAIIRTREEKGAFTSFTDFLDKVPAVVCNKRTIE
SLIKAGAFDSLGHARRALLVVHEQAVDSVISVKRKEAEGQFDLFADFGGADAEDGMSFSV
DVPDLPDWDKKQRLAFEREMLGLYVSDHPLSGLEHVLTRAADTGIANLLADEGRPDGSTV
TIAGLVTSLQRKMSKNGNPWAAVTIEDLEGAVEVMFFGETYLAYSTVLAEDQVVVLRGRV
RRRDDTMQLQAMEVSLPDITVGAESPLAVKVSHTRCVEPIILRLREVLATHPGSAEVHVQ
VLEPGKTTVVRAGDGLRVEKSPALFGDLKALLGPSCLL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgcgactgaggacttcgtccacctccacgtccacaccgagtactcgatgctg
gacggcgcggcccggatcggggacctgttcgacgaggtcgagcgcctggggcagaaggcc
atcgcgacgacggaccacggctacgtgttcggggcgttcgagttctggtcgcgggcgcag
gcgaagggcatcaagccgatcatcggcgtcgaggcgtacgtcacgccgggcacgagccgt
ttcgaccagactcgcgtgcggttcgggcagcaggggcaggagtcggacgacgtctcggcg
cgcggtgcgtacacgcacatgacgctgctcgcgaaggacaacgagggtctgcacaacctg
ttccgggcgtcgtcgctcgcgtcgctcgaggggcagatgggcaagtggccgcgcatggac
cgcgacctcctccagcgctacggcaagggcctcgtcgcgacgagcgggtgcccgtcgggc
gagatccagacgcgcctgcgcctcggccagtgggacgaggcggtgcggacggcgggcgag
ctccaggacatcttcggccgcgagaacttcttcgtcgagctcatggaccacgggatcgac
atcgagacgcgggtcacgaaggacctcctgcgcctcgcggagaccatcggcgcgcgcctc
gtcgcgacgaacgacctccactacgtgcgcgaggaggacgcctccagccaggaggcgctg
ctcgcgatcaactccggctcgacgctcgacgacccggacaggttcaagttcgacggcacc
ggctactacgtgaagtcggcggccgagatgcgccgggtcttcgcggagctccccgaggcg
tgcgacaacacgctgctcatcgccgagcagtgcgaggtgtcgttcaacacgaaggcgaac
tacatgccgcggttccccgtccccgagggcgaggacgagacgagctggttcgtcaaggag
gtggagcgcgggctgcaccgccggtacccgaacggcatcccggacgcggcgcgcaagcag
gcgcagtacgagaccgaggtcatcatccagatgggcttcccggggtacttcctcgtggtc
gccgacttcatcaactgggccaaggaccagggcatccgcgtcggcccgggccgtggttcg
gcggcgggctccatggcctcctacctcatgggcatcaccgagctcgacccgctggagcac
gggctgatcttcgagcggttcctcaaccccgagcgtgtgtcgatgcccgacgtcgacgtc
gacttcgacgagcgtcggcgcggggaggtcatccggtacgtcacggagaagtacggcgac
gaccgcgtcgcccagatcgtcacctacggcaccatcaaggccaagcaggcgctcaaggac
tcggcgcggctcctcggcttccccttcgcgatgggggagaagctcaccaaggcgatgccg
ccggccgtgatgggcaaggacatccccctgtcggggatcttcgaccccaagcacgagcgg
tactccgaggcggcggagttccgccagctccacgacaccgacccggaggcgcagcgcgtc
gtcgagctcgcgcggggtatcgaggggctgaagcggcagtggggcgtgcacgcggcgggc
gtcatcatgtcgagcgacccgctcatcgacatcatcccgatcatgcgccgtcctcaggac
ggcgcggtcatcacgcagttcgactacccgacgtccgagggcctcggcctcatcaagatg
gacttcctcgggctgcggaacctcacgatcctcgacgacgcgctcgagaacatcgagatg
aacggcaaggagccgatcgagatcgagtcgctcacgctcgacgacaaggcgtcgtacgag
ctgctcgcgcgcggtgacacgctcggcgtgttccagctcgacggcggccccatgcgcgcg
ctcctgcgccagatgaagccggacaagttcgacgacctctcggccgtcatcgcgctgtac
cgcccgggcccgatgggcatgaactcgcacacgaactacgcgctgcgcaagaacgggctg
cagaagatcgagcccatccacccggagctcgagcagcccctcgcggagatcctcgacgag
acctacggcctcatcgtctaccaggagcaggtccagagggccgcgcagatccttgccggg
tactcgctcggacaggccgacctgctgcggcgcgcgatgggcaagaagaagaaggagatc
ctcgacaaggagttcgtgccgttccaggcgggctgtcgggagcgcgggtactccgacgcc
gcgatccaggcggtctgggacacgctggtcccgttcgcgggctacgccttcaacaaggcg
cactccgccgggtacggcctcgtggcgtactggacggcgttcctcaaggcgaactacccg
acggagtacatggcggcgctcctgcagagcgtgcgcgacgacaaggacaagctggccctc
tacctcaacgagtgccggcgcatgcacatcaccgtgctcccgccggacgtgaacgactcg
gcggcgaagttcaccgcggtgggcggcgacatccgcttcggtcttacgggcgtgcgcaac
gtcggcgcgaacgtcgtcgacgcgatcatccgcacgcgcgaggagaagggcgcgttcacg
tcgttcaccgacttcctcgacaaggtaccggctgtggtgtgcaacaagcgcaccatcgag
tcgctcatcaaggcaggcgcgttcgactcgctcggccacgcgcggcgcgccctgctcgtc
gtgcacgagcaggccgtcgactcggtcatcagcgtcaagcgcaaggaggctgaggggcag
ttcgacctcttcgccgacttcgggggagcggacgccgaggacggcatgtcgttctccgtc
gacgtgccggacctcccggactgggacaagaagcagcgcctcgcgttcgagcgcgagatg
ctcggcctgtacgtgtccgaccacccgctgtccggtctcgagcacgtgctgacgcgtgcg
gcggacaccgggatcgcgaacctcctcgccgacgagggccggcccgacggctccaccgtg
acgatcgccggcctcgtgacgtcgctccagcgcaagatgagcaagaacggcaacccgtgg
gccgcggtgaccatcgaggacctcgagggcgccgtcgaggtcatgttcttcggcgagacg
tatctcgcgtactcgaccgtcctcgccgaggaccaggtcgtggtcctgcgcgggcgcgtg
cgtcggcgcgacgacacgatgcagctccaggcgatggaggtctcgctcccggacatcacc
gtgggcgccgagtcgccgctcgccgtgaaggtctcgcacacgcgctgcgtcgagccgatc
atcctgcgcctgcgcgaggtcctcgcgacgcaccccggctcggccgaggtgcacgtccag
gtcctcgagcccggcaagaccacggtcgtccgcgcgggcgacgggttgcgggtcgagaag
tcgccggcgctgttcggcgacctcaaggcgctgctcgggccgtcctgcctgctctga
DBGET
integrated database retrieval system
