Cellulosimicrobium sp. TH-20: B8281_14945
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Entry
B8281_14945 CDS
T04804
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B8281_14945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cet03400
]
B8281_14945
Enzymes [BR:
cet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B8281_14945
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B8281_14945
DNA repair and recombination proteins [BR:
cet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B8281_14945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ARK05831
UniProt:
A0A1W6DSJ3
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All DBs
Position
3362704..3363627
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AA seq
307 aa
AA seq
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MPELPEVEALARFLDDRATGRTVVAADVAQIAALKTFDPPVSALVGRVVTGARRHGKWLD
LVLAETGDGTGAPGPDAEVHLVFHLARGGWLRWSEKAPTTPVRPRLGGSGGGKAAVLALR
VRFDDGSGFDLTEAGTRKRLAVHVVRHPEEVRAIETLGVEPLDPAFTPEALGALMAARNQ
QVKGLLRDQSSIAGIGNAYSDDILHAARTSPFKLTRSFTPDEVARVHAAVGEVLAEAVAA
ASGKPAAELKDAKRAGMRVHGRTGLPCPVCGDTVREVSFADRSLQYCPTCQTGGQVLADR
RMSRLLK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaggccctcgcccggttcctcgacgaccgcgcgaccggt
cgcaccgtcgtggccgcggacgtcgcgcagatcgccgcgctcaagacgttcgacccgccc
gtctcggccctggtgggacgggtcgtcacgggcgcccgacggcacggcaagtggctcgac
ctcgtgctcgccgagaccggcgacgggaccggtgcgcccgggcccgacgccgaggtccac
ctcgtgttccacctcgcccggggcgggtggctgcgctggtccgagaaggcgccgacgacg
cccgtccgcccgcgcctcggcggcagcggtggcgggaaggccgcggtgctcgcgctgcgc
gtgcggttcgacgacggctccgggttcgacctcacggaggccgggacgcgcaagcggctc
gcggtgcacgtcgtgcggcacccggaggaggtccgggcgatcgagacgctgggcgtggag
ccgctcgacccggccttcacgcccgaggcgctcggggcgctcatggcggcgcgcaaccag
caggtgaaggggctgctgcgcgaccagtcgtcgatcgccgggatcgggaacgcctactcc
gacgacatcctgcacgcggcgcgcacgagcccgttcaagctcacgcgctcgttcacgccc
gacgaggtcgcgcgcgtgcacgccgccgtgggcgaggtgctcgccgaggccgtggcggcg
gcgtcgggcaagccggccgccgagctcaaggacgcgaagcgcgcggggatgcgcgtgcac
gggcgcacgggtctgccctgtcccgtgtgcggcgacaccgtgcgcgaggtcagcttcgcc
gaccgcagcctccagtactgcccgacgtgccagaccgggggccaggtcctcgccgaccgg
cggatgtcgcgcctgctcaagtga
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