Clostridium estertheticum: A7L45_01095
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Entry
A7L45_01095 CDS
T04811
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ceu
Clostridium estertheticum
Pathway
ceu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7L45_01095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceu03021
]
A7L45_01095
03019 Messenger RNA biogenesis [BR:
ceu03019
]
A7L45_01095
Transcription machinery [BR:
ceu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A7L45_01095
Messenger RNA biogenesis [BR:
ceu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A7L45_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
SAP
AAA_22
AAA_25
ATPase_2
Spore_III_AA
ALA1
OB_RNB
WHD_MCM2
Motif
Other DBs
NCBI-ProteinID:
APC38765
UniProt:
A0A1J0GBN7
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All DBs
Position
235399..236868
Genome browser
AA seq
489 aa
AA seq
DB search
MINKNFENITVAELKQRCKELGIKNISKLKKSELIEEINKTSQVSMQKDGVILREKISPK
SSSTVEENSIDNSEKHIETNSAPITKPTSNENIDTGFKNQNENKKEQLQEMINESGSARG
VLEIIENNSYGFLRGHNYLSGSDDIYVSPSQIRRFNLKTGDEVEGKVRTPKEGEKFKALL
YVLKVNGENPERAVGRKPFEKLTPIYPTQRLILETNAADLSSRMMDIISPIGKGQRGIIV
AQPKAGKTTLLKKIANSISINHPEVKLIVVLIDERPEEVTDMQRSIKGEVIYSTFDEEPD
HHTKVASMVLERAKRMVEQGQDVVILLDSLTRLARAYNLTITPSGRTLSGGLDPSALLMP
KKFFGAARNIEEGGSLTILATALVETGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPA
VDIYKSGTRREDLLLTKIEMETIYNLRKIMYREGNALGVTEKLLGLLSTTKSNKEFLEMI
NKNFELLAR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgataaataaaaatttcgaaaatattacagttgccgagctaaagcagcgttgcaaagag
cttggtattaaaaatatttctaaacttaaaaaaagtgagttaattgaagagataaacaag
acatcacaagtttccatgcaaaaagatggagtgattttaagagaaaagataagtcccaaa
agttcttctacagttgaagaaaatagtatagataattcagaaaagcatatcgaaacaaat
tcagccccaattactaaacctacttctaatgaaaatattgatacaggttttaaaaatcaa
aatgaaaataaaaaagaacaattgcaagaaatgataaatgaatcagggtcggcaagaggc
gtgctcgaaataattgaaaataatagctacggttttctaagaggacacaattatttgtca
ggttctgatgatatttatgtttcaccatctcaaattagaagatttaatttaaagacaggt
gatgaagtagaaggtaaagttagaacacctaaggaaggcgaaaaattcaaggctttacta
tacgtactaaaggtaaatggagaaaatccagagagagcagtaggtagaaaaccttttgaa
aagctaacccctatttatccaacgcagaggcttatacttgaaactaatgcagccgattta
tcttcaaggatgatggatattatttcccctataggtaaaggacaaagaggtataattgta
gcacagccaaaagcaggaaaaacgacacttcttaaaaaaatcgctaatagtatctctata
aatcatccagaagtaaaattaatagttgttttaatagatgaaagaccagaagaagtaact
gacatgcagaggtctattaaaggcgaagttatatattcaacatttgatgaagaaccagat
catcatacaaaagtagcttctatggtgcttgaaagagctaaaagaatggttgaacaaggt
caagatgtagttatactactagatagtttaactaggcttgcaagagcttacaatttaact
ataacaccttctggaagaactttatctggaggacttgatcctagtgcacttttgatgcca
aagaaattttttggagcagctagaaatattgaagagggtggaagtttaactatacttgcg
acagctctagtagaaacaggtagcagaatggatgatatgatttttgaagagtttaaggga
actggtaatatggaagttcacttggatagaaaacttcaagaaagaagaatattcccagct
gttgatatctacaaatcagggacaagaagagaagatttattacttacaaagattgagatg
gagactatatataatttaagaaaaataatgtatagagaaggcaatgctttgggcgtaacg
gaaaaacttcttgggttattatctacaactaagagcaataaggaatttttagaaatgata
aataagaattttgaattattagctagataa
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