Clostridium estertheticum: A7L45_02700
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Entry
A7L45_02700 CDS
T04811
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ceu
Clostridium estertheticum
Pathway
ceu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7L45_02700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceu03019
]
A7L45_02700
03009 Ribosome biogenesis [BR:
ceu03009
]
A7L45_02700
Enzymes [BR:
ceu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7L45_02700
Messenger RNA biogenesis [BR:
ceu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7L45_02700
Ribosome biogenesis [BR:
ceu03009
]
Prokaryotic type
rRNA helicases
A7L45_02700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrD-helicase
NAT10_TcmA_helicase
AAA_19
SecA_DEAD
ERCC3_RAD25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
APC39053
UniProt:
A0A1J0GCK1
LinkDB
All DBs
Position
complement(562376..563833)
Genome browser
AA seq
485 aa
AA seq
DB search
MIKENINDYNLSSELLKAISLLNFKDFTKVQKQVIPAVLAQKDVVVKSKTGSGKTAAYGI
PICQLVDWEENKPQALIITPTRELAIQVKEDIFNIGRFKRLKVSAIYGKSPFTDQKKELK
QKTHVVVGTPGRIMDHIEKGTFDTSNIKYLVIDEADEMLNMGFVDQIESILSGLSKDRVT
MLLSATMPKDIHSLCNRYMKDPIYIEIEDENKASDNILQEQYNVHEFDKIDLLRDLTIVE
NPDSCIIFCNTKVKVDSVFNDLIDLEYTCKKIHGGMEQSDRLRVMNDFKKGYFRYLVATD
VAARGIDIDNITLVINYDIPEDKESYVHRIGRTGRIGKMGRAMTFVTNRDNRFLYDIEQY
IGKEIPLKERPESEVVNNAKEEFINKMDTRPILKESKGAELSKEIMKLHINAGKKTKMRA
MDIVGTLCSIEGMTKDDIGIINIIDISTFVEILNNKGELVFTALQDTPIKGRLRTVSKEI
LADRY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaaacattaacgattataatttaagtagtgagttattaaaagcaattagt
ttgttaaattttaaggattttacaaaggttcaaaaacaggttatacctgcagttctagca
caaaaggatgtagtagtaaaatccaaaactggaagtggaaaaacagcagcatatggcatt
cctatttgtcaattagttgattgggaggaaaataaacctcaggcattaataattacacca
acaagagaacttgcaatccaagtaaaagaagatatttttaatataggtaggtttaaaaga
cttaaagtatctgctatttatggaaagtctcctttcaccgatcaaaaaaaagaacttaag
caaaaaacacatgtagtggttggaacccctggtcgcattatggatcatatagaaaaaggt
acatttgatacatcaaatataaaatatcttgtaatagatgaagcagacgaaatgcttaat
atgggattcgtagatcaaatagaatcaatcttaagtggcttatcaaaagaccgtgtaaca
atgttattgtcagctacaatgccaaaagacatacatagtttatgtaacagatatatgaaa
gatcctatatatattgaaatagaggatgaaaataaagcatctgataatatacttcaagaa
caatataatgtacatgaatttgataaaatagatcttttaagagatttaaccattgttgaa
aatccagatagttgcataatattttgcaatacaaaagttaaggtagattcagtttttaac
gacctaatagacctcgagtatacttgcaagaaaatacatggtggaatggaacaaagtgat
agattaagggtaatgaatgattttaagaagggttattttagataccttgtagctaccgat
gttgcagctcgtggtatagacatagataacattacacttgtaattaattatgatattcca
gaggacaaagaaagttatgttcataggataggaagaactggtcgtataggtaagatgggc
cgtgctatgacttttgtaacaaatcgtgataataggtttttgtatgatatagagcagtat
attggtaaagaaattcctttgaaggaaagacctgaatctgaagtcgtaaataatgccaaa
gaggaatttattaataaaatggatacaagacctattcttaaagaatcaaaaggagcagaa
ctcagcaaagaaattatgaaattacatattaatgcaggtaaaaagactaagatgagagca
atggatatcgtaggtaccctttgcagtatcgaaggaatgactaaagatgatataggaatc
atcaatataattgatatatctacttttgtagaaatattaaataataaaggtgaattagtg
tttacagctctacaagatacaccaattaaaggaagactacgcacagtaagtaaggaaata
ttagcagacagatattaa
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