Clostridium estertheticum: A7L45_10720
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Entry
A7L45_10720 CDS
T04811
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ceu
Clostridium estertheticum
Pathway
ceu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7L45_10720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceu03019
]
A7L45_10720
03009 Ribosome biogenesis [BR:
ceu03009
]
A7L45_10720
Enzymes [BR:
ceu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7L45_10720
Messenger RNA biogenesis [BR:
ceu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7L45_10720
Ribosome biogenesis [BR:
ceu03009
]
Prokaryotic type
rRNA helicases
A7L45_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
AAA_19
Motif
Other DBs
NCBI-ProteinID:
APC40505
UniProt:
A0A1J0GGL6
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All DBs
Position
2373017..2374462
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AA seq
481 aa
AA seq
DB search
MSNMKFEEFKISEEILKAIKNLEYKKPSDVQEAVIPIALEGRDIIVKSQTGSGKTAAFAI
PLCESADVGETQPQALVLTPTRELALQVSQDITNIGRYKKIRAIAVFGKQPIETQKKQLK
QRVHVVVGTPGRTLDHIERGTINLEKIKYLILDEADEMLSMGFIEQVEEVIKAVPKNRVT
MLFSATIPESIEAICKQYMVNPVKVEINPEKLTVEKIDQICYEVDEDKKFSLLKRLLYIE
NPDSCIVFCRTKENVDEITVQMKNRHYSCIKIHGGMIQNDRLDAMERFRKGEFRFLVATD
VAARGIDVENITHIINYDLPLERGNYVHRIGRTGRAGKKGKAITFVTHNENRFLKAIEQY
IGMEIPKGSIPTKEDSEPFRVAFYEKHDAKPIIKKTKLSNFNSDIMKMYISAGKKKKIRT
LDIVGTICNIEGVSSDDIGIIDIQDSFSHVDIMNGKGDLVLKSLKNGTIKGKTIRAQKAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacatgaaatttgaggaatttaaaatcagtgaagaaatattaaaagcaattaaa
aatttagaatataaaaaaccttcagatgtacaagaagctgtaatccctatagctcttgaa
ggcagagatattatagtgaaatcacaaactggtagtggaaaaacagctgcattcgctata
cccctttgcgaaagtgctgatgttggagaaacgcagccacaagctttagtattaacacct
actagagaactagcacttcaggtaagtcaagatataacaaacataggcagatataaaaag
attagagcaatagctgttttcggtaagcaaccaatagaaacgcaaaagaaacaacttaag
caaagagtacatgtagtagtaggtacaccaggaagaactcttgaccatattgaaagaggt
actattaatttggaaaagataaaatacctaatattagatgaagcagatgaaatgcttagc
atgggctttatagaacaagttgaagaagttattaaggctgtccctaaaaatagagttact
atgttattttcagcaacaatcccggagtctattgaagcaatttgtaagcaatatatggtt
aaccctgttaaagtagaaataaatcctgaaaagttaacagttgagaaaatagatcaaata
tgttatgaggtagatgaggataaaaagttcagtctacttaagagattgctttatattgaa
aatccagattcttgtattgtattttgcagaacaaaagaaaatgttgacgaaattactgtt
caaatgaagaaccgtcattattcatgtattaagatacatggaggtatgatacaaaatgat
agattagatgctatggagagatttagaaaaggcgaatttagattcttggtggctacagat
gttgccgcaagaggaatagatgttgaaaatataacccatattataaattatgatttacca
cttgaaagaggtaattacgtacatagaataggtagaacagggcgtgctggaaaaaaagga
aaagctataacttttgttactcataatgaaaatagattcttaaaggctatagaacaatat
attggtatggagataccaaaagggtcaattccaacaaaggaagattcagagccctttaga
gtagcattttatgaaaaacatgatgctaaacctattattaaaaagactaaattatcgaat
ttcaatagtgatataatgaaaatgtatatcagtgcaggaaaaaagaaaaaaataaggact
ctagatattgtaggtactatttgcaatatagaaggagttagttctgatgacataggtatt
atagatattcaagatagtttttcacatgtagatattatgaatggaaaaggtgacttagtg
ttaaaatcccttaaaaatggtacaataaaaggaaaaactattagggctcagaaggctaat
aaatag
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