Caprimulgus europaeus (Eurasian nightjar): 306717608
Help
Entry
306717608 CDS
T11931
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceur03019
]
306717608 (HTT)
04131 Membrane trafficking [BR:
ceur04131
]
306717608 (HTT)
03029 Mitochondrial biogenesis [BR:
ceur03029
]
306717608 (HTT)
Messenger RNA biogenesis [BR:
ceur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
306717608 (HTT)
Membrane trafficking [BR:
ceur04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
306717608 (HTT)
Mitochondrial biogenesis [BR:
ceur03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
306717608 (HTT)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
306717608
NCBI-ProteinID:
XP_079045328
LinkDB
All DBs
Position
4:<11224986..11311965
Genome browser
AA seq
3096 aa
AA seq
DB search
MATMEKLMRAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIGNLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGITQVSVSKDESASR
NRSGSIVELIAGGGSSCSPVLVRKQKGKILLGEEEGLEDDPETRSDVSTASFAASMKSEI
NSELASSSGVSTAGSVGSAAADSTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGEE
DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSETVLEGA
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVDR
FTSKEDAADPGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAMREEYEEQYVSDILNYIDHGDPQIR
GATAILCGTIINSILIKSRFDVEKWLINVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACTAVKHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG
KTESLHRGFHHYTGLLKLQERVLDNVVICLLGDEDPRVRHVAAASLIRLVPKLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRIYRGYNMLQSPTDVTMENNLSRV
IAAVSHALTISTTRALTFGCCEALCLLSTTFPVCTWTVGWHCGVSQPSPSDEVQKGCTIG
MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEDDSNQGAAKQEEP
WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG
KERESVEQASVPMSPKKGGETSPATRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKA
THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP
TMATVCVQQLLKTLFGTNLASQYDGFSSNPSKAQGKAQRLGSSSLRPGLYHYCFMAPYTH
FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSITSAAKHRADKNAIHSHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASERKAVTHAIPALQPI
VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR
LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS
VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISRQAIDRLRCGENNVAAPE
DRTEFKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI
HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSELVQSMIPTHPSLVLLWCQILLLVN
YTNYNWWSEVHQTPKRHSLSTTKLLSPQIAGDSDGSTLESKRGMCNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL
AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL
QNSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG
EDQPALENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPEPDLNSFMTSKEFNLSL
LAPCLSLGMNEISRDQKSNFFETARRVTLDHVSTTVQNFPASHQVFQPLLPTEPSAYWKK
LNDIFGDEVRYQSMMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVVSVEALSWHL
MHDQIPLSIDLEAALDCCCLTLQQPGLWNLLASAVNVTYACSLINCIRFIIEAVAVEPGN
QLLSPERKKNTSKGLSEGEVDSNTQKDKNITAACEMVAEMVECLQTVLALGHKRNSSIPA
FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF
KEFIYRINTLGWVSRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAI
TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD
NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN
NITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS
NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPAT
CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII
SEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS
DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM
YTGKEKISPSRTTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD
FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR
TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE
LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgagagccttcgagtcgctgcgctccttccagcagcag
cagggtccggccgccatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagttaatcattgcctaacaatatgtgaaaacatagttgctcagtct
ttaagaaattctccagaatttcagaaactgctggggattgctatggaactctttctcctc
tgtagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacaattagaactgtataaagagatt
aaaaagaatggtgcttccagaagtttacgtgctgcactctggagatttgctgagcttgcc
catctagttcgacctcaaaaatgcaggccatacttagtgaatcttttgccctgtctaaca
cgaataagtaagagacctgaagaatcggtccaagagacactagctgcagcaataccaaaa
atcatggcagcatttggcaattttgcaaacgacaatgaaataaaggttttattgaaggct
ttcataggtaatctaaaatccagttcccctactatccgtcgaacagcagcaggatcagca
gtaagcatctgtcaacattcacgaagaatgcagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtagaagatgatcatcctactcttttaattctgggtgtt
ttacttacactgaggtatctcatacctttattgcaacaacaagtaaaggataccagcctg
aaaggcagttttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacaactt
atacaggtttatgaattgactctgcattatacccagcatcaagaccataatgttgtgact
ggagctttagaattattacaacagctctttagaacaccaccacctgaacttctccatgcc
ctgactgcttcaggtggcattacacaggtcagtgtatccaaagatgaatctgccagcagg
aaccgcagcgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgtgagaaagcaaaaaggtaaaatacttcttggtgaagaagaaggtttggaagatgat
cctgaaacccggtcagatgtcagcactgcatcgtttgcagcctctatgaagagtgagata
aacagtgaactagcttcttcatcaggtgtatcgacagctgggtcagtagggagtgcagct
gctgattctactggacatgatataattactgagcagccacgttctcaacacacgttacag
tcagactctgtagacctgacaagctgtgatttgacgagtacagctactgaaggagaagaa
gatgatgtgcttagtcgaagctccagccagatcagtgctgtccagtcagatcctactatg
gacttgaatgatggtacacaggcttcctcaccaatcagtgatagctctcagactactaca
gaaggtccagactctgctgtaaccccttcggacagttctgaaactgttttggagggtgct
gaaggacagtattctggaatgcagattggacagcttcaggatgaggaagatgaggctgca
aatattctccaagatgattcatcagagtctttcagaaattcttccattgctcttcaacag
cctcacctgttgaaaaccatgagccatagcaggcagccttctgatagcagtgtagataga
tttacatcaaaagaagatgcagccgatcctggtgatcacgaaaataagccctccagggta
aagggagacataggtcactataccgatggaaattctgctcctttagtgcactgcgttaga
ctcctgtcagcctcttttctactcactggggagaaaggagccttagttcctgatagagat
gtgagagttagtgtaaaagccctggcagtaagttgtgttggagcagctgtcgcgcttcac
cccgagtctttcttcagcaagctgtataaaacacccctggaagcaatgcgagaagagtat
gaggagcagtatgtatcagatattctgaactacattgaccatggagatccccagattaga
ggagctactgccattctgtgtggaacaattatcaactccattctaattaaatcccgcttt
gatgtggaaaaatggctaataaatgtcagaagctcaacaggaaatctcttttccttggta
gactgcatacctctgctacagaaaacactgaaagatgagtcttctgttacttgcaaactg
gcttgtacagctgtgaagcattgcatcatgagcttatgtagtagcagttacagtgaacta
ggtttacaattaattgttgacctccttacgctgaagaatagctcatactggctggtaagg
acggaacttctggaaacacttgcagaggtggattttcggctagtcagcttcctggaagga
aaaactgagagcttgcaccgaggttttcatcattatactggtttactaaaacttcaggag
agagtgcttgataatgttgtaatatgtctgcttggagatgaagatccaagagtgagacat
gtagctgcggcttcattaataaggcttgttccaaagctgttctataactgtgatcaagga
caggctgatccagttgtggcagtagcaagagaccaaagtagtgtctacctgaaactacta
atgcatgaaacacagcctccatctcactttgcggtgagcactatcaccagaatatataga
ggttacaatatgctgcaaagtccaacagatgtcactatggaaaacaatctctcaagggtt
attgcagcagtttcccacgcattgacaatatccactacaagagcacttacgtttggctgc
tgtgaagctttgtgtcttctctccacgacgtttccagtctgtacctggactgttgggtgg
cactgtggtgtttcccagccaagtccttcagatgaagttcagaagggctgcaccattgga
atggctggcatggtcctgtctctcctttcatcagcatggttcccactggacctctctgca
catcaggatgctttgatactgactggaaacttgcttgcagcaagtgctcccaaatgctta
aagaatccctggagtgctgaagacgattcaaaccaaggtgctgcaaagcaggaggagccc
tggccagctctggcagatagaactcttgttaccttagtagaacagctcttttctcatctg
ctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggcccagcagta
aaggcagcattaccttctctcacaaatccaccttctctgagtccaattcggaggaaggga
aaagagagggagtctgtcgaacaggcgtctgtgccaatgagccctaaaaaggggggtgaa
acgagtccagctactaggcaaactgatgctactggtcctgttccaacaagtaaatcatct
tcagtaggaagcttttatcatcttccttcatatctgaagttatacgatgtcttgaaagca
acccatgctaattataaggttactttggatctccagaacagtaatgaaaagtttggatgt
tttttacggtctgccttagatgttctgtctcaaatcttggaacttgctactcttcaagac
attggaaagtgtgtagaagaaattttgggatacctaaaatcatgtttcaacagagaacca
acaatggcaacagtttgtgtacagcagttattgaaaacattgtttgggactaatctggct
tctcaatatgatggcttctcttcaaaccccagcaaagctcaaggcaaagcgcaacgctta
ggttcttccagtttgagacctggtctctatcattattgcttcatggcaccatacacacat
tttacacaggcccttgctgatgctagtctaaggaacatggttcaggctgagcaagaacat
gatgcttcaggatggtttgatgtactgcagaaagtttctacacagctgaaaactagcatt
acgagtgcagcaaaacaccgtgctgataagaatgctattcacagtcacattcgtttattt
gaaccccttgtcataaaagcgttgaaacaatatactacaacaacgtcggtacagctgcag
agacaagttctagacttgcttgctcaacttgttcagctacgagttaactactgtcttctg
gattcagaccaggtgtttattggatttgtgctaaagcagtttgaatacattgaagtagga
cagttcagggaatctgaagcaattattcctaatatcttttttttcctggtgttgctgtct
tatgagcggtatcattccaaacagataataggaattcctaagatcattcagctgtgtgat
ggtattatggccagtgagaggaaagctgttactcatgcaataccagctctgcaacctatt
gttcatgatctctttgtattaagaggaacaaataaagccgatgctggaaaagagttggaa
acacagaaggaggtggtagtgtcaatgctgctgagacttattcagtaccatcaggtgcta
gaaatgttcatcttagtattgcaacagtgtcataaagaaaatgaagacaaatggaaaaga
ttgtcccggcaaatagctgacattattctcccaatgcttgcaaaacagcagatgcacata
gactctcacgatgctctgggagtactgaatactttgtttgaaattttggctccttcatcc
cttcgccctgtggacatgcttttaaggagtatgttcgttactcctaaaacaatggcatca
gtgagcactgtccagctgtggatttctggaattttagctatccttagagttctgatttca
cagtcaacagaagacatcgttctatcccgtatacaagaactttccttctcaccgtatttg
atttcacgtcaagcaattgacagactgagatgtggagaaaataacgtagctgcaccagag
gatcgcactgagtttaagcaggctaaatatctgcctgaagagacattttctaggttctta
ttacaacttgttggcattctactggaagatattgtaaccaaacagttgaaagtagacatg
aatgagcagcaacatactttctactgccaggagctgggcacgctgcttatgtgcttaata
catatcttcaaatcagggatgtttagaagaatcactgctgcagccaccaggctttttaca
ggagatggatctgatggtagtttctatacccttgaaagtttgagtgaacttgttcagtcc
atgattcccacacatccttctttagttctcctctggtgtcaaatcctgcttcttgtcaat
tataccaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttct
acgactaaattgcttagccctcagatagctggagacagtgatggatcgactttggaatct
aaacgtggcatgtgcaatcgagagatagtgagaagaggagcactcattcttttttgtgac
tatgtttgtcaaaacctacatgattctgaacacttgacctggcttattgtgaatcatgtt
caagacttgattaatctgtcccatgagcctccagtacaagactttattagtgctgttcac
aggaattcagcagccagtggtctcttcatccaggccattcaatctcggtgtgagaatctt
gcagctcccacaactctgaagaagactttacagtgcctagagggaatacatctcagccag
tctggggctgtcttaacattatatgttgataagcttctgtgtactccgttccgtgtgctt
gctcgcatggttgacacactggcttgccgtcgggtagaaatgcttttggctgcaacttta
cagaacagcattactcagttaccagttgaagaactggatagaattcaggaataccttcaa
aacagtggattagcaacaaggcaccaaagactctactcactcttggataggtttcgtctt
atggtagcaccagacacaactagtccttcccctctggttacctcacacccacttgatggc
gaagaccaaccagctttagagaatgtaattctggacaaagactggtatgtgtcactagtg
aggtcgcagtgttgcatcaagtctgactcagctctgctagaaggtgcagagctggtaaat
aggattcctgagcctgacttgaactccttcatgaccagcaaggaattcaacctaagcttg
ttagcaccttgtttaagccttggcatgaatgaaatctcaagagaccagaagagtaacttc
tttgaaacagctcggagggtaactctggatcatgtgtctaccactgtacaaaactttcct
gccagccaccaggtttttcaaccattattgccaaccgagccgtcggcctactggaaaaaa
ctaaacgatatctttggagatgaggtgaggtatcagtctatgatgacactttgtcgtgca
ctggctcagtatttgttgttgctctcaaaactaccagctggtctccgtgttcctccggac
aaagaggatgatatcctgaaattcgtagttgtgtcagtagaggcactatcatggcattta
atgcatgaccagattccattaagtatagatcttgaagctgctctggattgttgctgtttg
actttacagcagcctggtctctggaatttgctggcttctgcagttaatgtgacatatgct
tgctccttaattaattgcattagatttatcatagaagcagttgcagttgaacctggtaat
caacttcttagtcctgaaagaaagaagaatacttcaaaaggcttaagtgagggtgaagtt
gattcaaacacacagaaagataaaaacattactgcagcttgtgaaatggtagctgagatg
gtggaatgcttacagactgtcctggcactggggcacaaaagaaacagcagtattccagcg
tttcttactcctgtcctcaagaatatcatcatcagtttagcaaggctacctctagtgaac
agttacacaagagtacctcccctggtctggaaattaggctggtcaccgaagcctgcaggt
gactttggcacagtttttcctgaaatcccagtagaatttcttcaagaaaaagaaatcttt
aaggagttcatctatcgcattaatacacttggatgggtcagccgtactcagtttgaagag
acttgggctactttgcttggtgtgcttgtaactcagcctattgtaatggaccaagaggag
aaccaacaagaggaagatacagagaggacccaaattaatgttcttgcagtacaagccata
acttccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagttagctgt
ttggaacagcagccccgtaacaaagccttaaaagctctggacacaaggtttggaaggaag
ctaagtgttatcagaggaattgttgaacaggaaattcaagcaatggtatccaagagagat
aatattgctactcatcacttataccaagcctgggaccctgttccatcactttctcctgct
actacaggtgctcttatcagccatgaaaaactcttactgcaaatcaatactgaacgagaa
ataggagatatggactataaactgggacaggtctctatacactccatatggttaggaaat
aatatcactccactgagagaagaagagtggggtgaggatgaagaagatgagaatgatata
cctgctccttcctcaccaccaacctctcctattaataccaggaaacatcgtgctggtgta
gatattcattcttgttctcagttcttgcttgaactctatagtcagtggatattgccatca
aaccccagcaagagaacgccagtcattttgattagtgaagtggtgcgatcacttctggca
gtatcagacttatttacagaaaggaatcaatttgagatgatgtatacaacattgacagaa
ttgagaaaggtgcatccatcagaagatgagattcttgtacagtatttgataccagccact
tgtaaagctgctgctgttcttggaatggataaagctgtggctgaaccagttagtcgactg
ctggaatcaaccctaagaagcacccatatgccaagtcggattggagctctgcatggaatt
ctttatatccttgagtgtgacttgcttgatgagacagcaaagcaactcattccaattatc
agcgagtatctgctctctaatttgagaggagtagcacattgtgtgaatatccacaaccaa
cagcacatcttggtaatgtgtgcagctgctttctatttgattgagaattacccacttgat
gtagggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagt
gatgaatcaacaccatccattatttatcactgtgttctgagaggattagaacgactcctt
ctttcagagcagctttcgaggctggatagtgaatcgctcgttaaactgagtgttgacaga
gtgaatgtgcagagccctcacagagcaatggcagcgcttggattaatgctgacttgcatg
tacacaggaaaggaaaaaatcagtcccagtcgtaccacggatgcaaatcctgctgctcct
gacagcgaatctgtgatcgtagctatggaacgagtatctgtcctttttgataggatcaga
aagggatttccttttgaagctagagtagtggctcggatccttccgcagttccttgatgat
ttttttcccccacaagatgtaatgaataaagttattggagaatttttatccaatcaacaa
ccttacccacagttcatggcaacagtagtttataaggtattccagacactacatagtact
ggacagtcctcaatggtccgtgactgggtgatgctgtctctctctaatttcacacaaaga
acacctgtggcaatggcaatgtggagtctttcctgcttttttgtcagtgcttccaccagt
caatggatttcagcaattcttccacatattatcagcagaatgggaaaatctgagcaagtg
gatgttaacatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaa
ttagatcgaagggcctttcagtcggtgtttgaggtggtagcatctccaggaaccccatat
catcgcctactaacttgtttgcaaaatgtccacaaggtcacagcatgttga
DBGET
integrated database retrieval system
