Caprimulgus europaeus (Eurasian nightjar): 306720488
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Entry
306720488 CDS
T11931
Symbol
VPS50
Name
(RefSeq) syndetin isoform 1
KO
K23288
syndetin
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ceur04131
]
306720488 (VPS50)
Membrane trafficking [BR:
ceur04131
]
Protein recycling
Others
EARP complex
306720488 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
306720488
NCBI-ProteinID:
XP_079050294
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All DBs
Position
7:complement(33769795..33863599)
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AA seq
967 aa
AA seq
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MQKIKSLMTRQGLRSPQESVHDLSPIESLRIPSKEELRELREEPPDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLNLQELEDYRNKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAAVSSV
SDGSNVIGTEDSSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSSFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTATLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKKSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFELTGLGLSSSRLRTTLNRIQESLIDLDVSADPTGTLTAAEERKEKVPSPHLSHLVVL
TTGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAID
DVDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagtcctattgaaagccttcggattcctagtaaggaggagctcagagaacta
cgtgaagaaccacctgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaaatacgagttagagaggcttcccccggta
cttaatcttcaagaactggaggattacagaaacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacaacctgcatatgttgaggaacttgaa
cgtgttacatcactgcagactggccttcagttagcagctgttatttgcacaaatggaaga
aggcacctgaatatagcaaaggaaggcttcacacaaactagtttggggcttcttgcaaat
caaaggaaacgacagttgcttattggacttctaaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttagaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggaacaattggatgtagcg
ctctccaaaatatgcaagaactttgatatcagtcattatacgaaggttcagcaggcttac
aggctgcttgggaaaacacagacagcaatggaccagttacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagtccttggatacgtggagctgtgtgcgggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccctgcctggctgatctctgcaaagccctctgggaagtgatgctcagttactac
cgaacgatgcagtggcatgagaatcatgaccaagatgaggcagcggctgtatcttctgtt
tcagatggcagcaatgtgattggaactgaagacagcagttttgaccgcagctatgtaaaa
aagaaattggaacatggtctttcacgaatatggcaggatgttcaattgaaagtgaaaaca
tatcttctgggaacagatctgtctagcttcaaatatgacgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacttaccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattctgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcgcctagtaagcagcctgcttcagcaatttcaacaacagcaacgttatttgagcagtac
tgtaacggaggaaacccatttgagattcaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcagatgaacaagaaaaaagcgcatatcaagagtat
gatagcgacagtgatgttcctgaagagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtgaaaagtgtttctcgagaaactctgaggagcagaaagaaatcagattat
aacctcaataaagtgaatgcacctatcctaacaaacactacgctgaatgtaataaggctt
gttgggaagtacatgcagatgatgaatattctgaaaccaattgcatttgatgtgatccac
ttcatgtcccagctcttcgattactatctgtatgcagtctatacgttttttggccgaaat
gacacgtttgaattaacaggattgggcctcagtagcagcagattacgcaccacactgaac
agaattcaggagagtctgattgatctggatgtctctgctgatcccacaggaactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatcttgtagttttg
acaactggcaattcgctgtatggtttggcagagagagtggtggccacagaatccttggta
tttctggctgagcagtttgagtttcttcagcctcatcttgatgcagtgatgccagcagcc
aagaagccttttcttcagcagttctattctcagacggtgtcaactgccagtgaactacgt
aaaccggtttattggattgttgctgctaaagccattgattatgaacaaatgctgcttctc
atgactaatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtagat
gctcttttaaaggaatttgaagaatttaacagaaggttgaacgaagtgtccaagagagtc
cgtattccgctgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtcaagaagtgcagcaatgaaggacgtgccttgatg
caactggactttcaacaattcctaatgaaactagaaaagttaacagacatcaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactaccttacagaaaatgacatg
gaaagctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
gtttgtctgggctcccacatcaacaaaaaggcaagacagaagctgctagctgctattgat
gatgtagacaggcctaaaagataa
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