KEGG   Caprimulgus europaeus (Eurasian nightjar): 306721642
Entry
306721642         CDS       T11931                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ceur  Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03013  Nucleocytoplasmic transport
ceur03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ceur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    306721642 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    306721642 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ceur03019]
    306721642 (THOC3)
   03041 Spliceosome [BR:ceur03041]
    306721642 (THOC3)
Messenger RNA biogenesis [BR:ceur03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     306721642 (THOC3)
Spliceosome [BR:ceur03041]
 Complex C
  Other components
   EJC/TREX
    306721642 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    306721642 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Vps41 DSE1_N Beta-prop_WDR36-Utp21_1st eIF2A Beta-prop_TEP1_C Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 RMC1_N NBCH_WD40 Tricorn_2nd Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 TRM82_WD B-prop_COPA_B_2nd PAC11 Beta-prop_EIPR1 Beta-prop_SPT8 ASA1 PD40 Beta-prop_WDR75_1st Peptidase_S9_N Beta-prop_Nup120_160 Beta-prop_NWD2_C Cytochrom_D1 Beta-prop_WDR11_1st Beta-prop_LRRK2 TP_0598_N YNCE PROPPIN Beta-prop_ELP1_1st DPPIV_N
Other DBs
NCBI-GeneID: 306721642
NCBI-ProteinID: XP_079052384
LinkDB
Position
8:41162529..41166374
AA seq 323 aa
MALSPYVQAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFLLEKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgctgtctccctacgtgcaggccatgcaggagctgttccgcgcgaacacgcggagc
cgcgagttcccggcgcacggcgccaaggtgcactcggtggcctggagctgctgcggtcgc
cgcctcgcctccggctccttcgacaagaccgccagtgtcttcctgctcgagaaggaccgg
ctggtgaaagagaacaactaccggggccatggggacagtgtggatcagctctgctggcac
cccagtaaccctgacctcttcgtcacagcatctggggacaaaaccatccgcatctgggac
gtccgcaccaccaagtgcatcgccactgtcaataccaaaggggagaacatcaacatctgt
tggagccctgacggacagaccattgctgtggggaacaaggatgacgtggtcactttcatc
gatgccaagacgcatcgctccaaagctgaggaacagttcaagtttgaggtgaacgagatc
tcctggaacaacgataacaacatgttcttcctcactaacgggaacggttgcatcaacatc
ctgagctacccggagctgaagcccattcagtccatcaatgctcatccttcaaactgcatc
tgcatcaagttcgatcccatggggaagtactttgccacgggcagtgctgacgcgttagtc
agcctctgggacgtggatgagctggtgtgtgtgaggtgcttctccaggcttgactggcct
gtccgaacactgagctttagccatgatgggaagatgcttgcctcagcgtcagaagatcac
ttcattgacattgcagaggtggaaacaggagagaagctctgggaggtgcagtgcgagtcc
cccaccttcacagtcgcctggcacccgaagaggccgctgctggccttcgcctgtgatgac
aaagatggcaaatacgacagcagccgggaggctggcaccgtcaagctcttcgggctcccc
aatgactcctaa

DBGET integrated database retrieval system