Caprimulgus europaeus (Eurasian nightjar): 306723151
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Entry
306723151 CDS
T11931
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ceur04147
]
306723151 (COL18A1)
00535 Proteoglycans [BR:
ceur00535
]
306723151 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
ceur00536
]
306723151 (COL18A1)
Exosome [BR:
ceur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
306723151 (COL18A1)
Proteoglycans [BR:
ceur00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
306723151 (COL18A1)
Glycosaminoglycan binding proteins [BR:
ceur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
306723151 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
306723151
NCBI-ProteinID:
XP_079054840
LinkDB
All DBs
Position
10:<42030034..>42080664
Genome browser
AA seq
2080 aa
AA seq
DB search
MGTPVQRDSGEHRYRGNTEASGAGRHRYNMGGPREHRCPPRWLLLGLFVLLVPTASQEPA
RDEAWCVPLSVITGWVRCVGRRLPQVQASWKSDRRWAVKSVDYLLEQGFMSSRNSLGMAG
RSNKARSPFPMAPAPPRLALLLLLLCCFSCSKTQLLDWIWGSTKTTRRPAALGEGTAPLL
APLASATGPTPGTWGGRVVGDVTTPQSQELDPGTAVGTAAENTEQLDGNAMGLVEGMAQP
RIAPPQGMSPVPGQDVASSSTEDSELLRTGTIEDLQLLEAGSTKDSQLLGMGTTEDLQLL
DTGSTKDLQLLDTGSTEDLQLLRMGTTEDPQLLWTGSTKDPQLLEAGTTKELQLLEMGNT
KDLQLLGPWATKDTQLLEIGTIKDPQLLGPWTTKDTQFLETAATKDPQLLRTRTSEDPQL
LGTGSTKDPQLLETATTKDPQLLRTRTAEDPQLLGTGSTKDPQLPVLWTTEDPQLLETAT
TKDPQLLRTRTAEDPQPLGMGTPTSAGTRVPLQRPAGPRPGSAPFPLSPGDSTRRQAVPP
WDPTAQPPRHHHGASPTPPNQRPSTGHHGLALAGTTGSQSLPLPSRRVATAVDAPLAHHS
APLEFDLLTATLRLYGPNGAGLASFPPRLVPPAGRCLPVPTQLPFCSLLATDHVRLPNYL
RHGGEAEIRAALHEWEGLLESRCHRYVEWFLCLLLLPGCSPSVPVTPPPCQGFCEAVRDL
CWMHLAGGRLPLPCDALPEEDEGFPCVFINASAENLSTEVSLLELIGDPPPEEILKIYGP
DNNPGYVFGPNANTGQVARYHLPNPFYRDFSLLFHIQPTTPRAGVLFAITDSSQSIIYMG
VKLSELRAGKQQIIFYYTEPGSPASYAAATFTVPTLLNQWTRFAISVEEDEVILYLDCEE
HERVRFERSPDEMELEDGSGLFVAQAGGADPDKYQGVIADLKLRGDPRAAERQCEEEEDD
TEEVSGDFGSGAEGGHQPLEKDRSVPGLVDAVPVTSPPVAAGGGSRSGGGSPQQAERTRV
EETLQVSAGGAGPKGEKGEKGERGLKGDTGTSGIVGTGSVKGEKGEKGELGVKGSAGFGY
PGSKGQKGEPGDPGPPGTPSRHADGSVVEQVTGPPGPPGKDGAPGRDGEPGDPGEDGKPG
DVGPQGFPGTPGQPGMKGEKGDPGVGPRGPPGPPGPPGPPGPSFEHDKLTFIDMEGSGFG
GDLETLRGPRGPPGPPGPPGVPGLPGEPGRFGMNRTDLPGPPGLPGRDGAPGPPGPVGPQ
GPPGRDGVAGQPGPKGEQGDVGDLGLPGAPGPKGSKGEMGPAGPPGEMGLAGLPGPIGPR
GQPGPPGPPGPPGLGYEAGFGDMEGSGLPFAASSPGPPGPEGPQGVPGLPGLKGEVGSPG
QPGPPGPKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPPGP
PGQVISVSSEDQTLAAVPGPEGRPGHAGFPGPVGPKGDRGPSGPQGPPGLKGEKGEPGVI
ISPDGTVVTAKGKGEKGEPGLRGPVGPSGPQGRAGMKGEIGFPGRPGRPGMNGLKGEKGD
PADVTSVLGLRGPPGPPGPPGPPGPPGSVVYDSSNAFGDSSHPALPAFPGFHQFPGQKGE
KGDVGAPGPPGHFPYDPSHFGATLRGDKGEAGPKGEKGEPGSTPLYGAGISGLPGPPGPQ
GYPGLPGPKGDSIVGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQAISIPG
PPGPPGPPGPPGTSGTSLGLRAMPTYQAMLSAAHELPEGGLVFLSDRQELYVRLRGGFRR
VLLEEHNLIPSSALDNEVYDKPPSVHYAGPQPPLQPRGPLHPLRNHSPPPTARPWRGDEV
VANQHRLPEQPLLHHQHELLNSYYIHRRPDPAPVAAHVHQDFQPALHLVALNAPLSGGMR
GIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLRDEVLFSNWE
ALFTGSGAPLRAGARVLSFDGRDVLRDAGWPQKSVWHGSDAKGRRLPENYCEAWRTEERT
ATGQASSLASGKLLEQVASSCQQTFIVLCIENSFMTAAKK
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atggggaccccggtgcagcgggactccggggagcaccggtaccgcgggaacaccgaagcc
agcggggctgggaggcatcggtataatatggggggaccccgggagcaccggtgccccccg
cgatggctgctgctcggactctttgtcctgctggtccccaccgcttcccaggaaccggca
cgtgacgaggcgtggtgcgtgcccctctctgtcatcacaggctgggtgagatgtgtgggc
aggcggctgccccaggtacaggcgagctggaagtcagacaggcgctgggccgtgaaatcg
gtggattatttactggagcaaggcttcatgtcatctaggaacagcttgggcatggctggg
cggagcaacaaggctcgttctcccttccccatggccccagctccacctcgcttggctttg
ctgctcctcctgctttgctgcttctcctgctccaagactcagctcctggactggatttgg
ggcagcacaaagaccacgagacgcccagcggcactcggtgagggaaccgcaccgctgctg
gcaccgctggcctctgccacaggtcccaccccagggacgtggggtggccgggtggtgggg
gatgtcaccaccccgcagagccaggagctggatcccggcacggcggtggggacggctgct
gaaaacacggagcagttggatgggaatgccatggggctggtggagggcatggcacagcca
cgcatcgctcctccccagggaatgtcacctgtccctggccaggatgtggccagcagctcc
accgaggactcggagctcctgaggacagggaccatcgaggacctgcagcttttggaggca
gggagcaccaaagactcacagcttctggggatggggaccactgaggacctgcagctcctg
gacactgggagcaccaaggacctgcagctcctggacactgggagcaccgaggacctgcag
ctcctgaggatggggaccactgaggaccctcagctcctgtggacagggagcaccaaggac
ccacagctgctggaggcagggaccaccaaggagctacagctcctggagatggggaacacc
aaggacctgcagctcctgggaccatgggccaccaaagatacacagctcctggagataggg
accatcaaggacccgcagctcctgggaccatggaccaccaaggatacacagttcctggag
acagcagccaccaaggacccacagctcctcaggacaaggacctctgaggacccgcagctc
ctgggaacagggagcaccaaggacccacagctcctggagacagcgaccaccaaggaccca
cagctcctcaggacaaggactgctgaggacccgcagctcctgggaacagggagcaccaaa
gacccacagctcccagtgctatggaccaccgaggacccacagctcctggagacagcgacc
accaaggacccacagctcctcaggacaaggactgctgaggacccgcagcccctggggatg
ggaacccccacatcagcagggacacgggtgcccttgcagagaccggcaggtccccgccca
ggtagtgccccttttcctctctccccaggtgacagtacccgcaggcaggcagtgccacct
tgggaccccacggcacaaccaccccgacaccaccacggagcatcgcccaccccaccgaac
cagcggcccagcaccggccaccacgggctagcgctggccggcacgaccgggagccagagc
cttcctttgcccagcaggagggtggccaccgctgtggatgctcctcttgcccatcactcc
gctcctctcgagttcgatttactaaccgccacgctgcgactctacggccctaacggcgcg
gggctcgcgtccttcccgcccagactggtgccaccggccggccgctgccttcccgtcccg
acccagctgcctttctgcagcctgctggccaccgaccatgtcaggttgcccaactacctc
cgccacggcggcgaggcggagattcgggcggctttgcatgagtgggaggggctgcttgag
tcgcgctgccatcgctacgtggagtggtttctctgcttgctcctgctccctgggtgtagc
ccctcggtccccgtaacccccccaccgtgccagggcttctgcgaggccgtcagagacctg
tgttggatgcacttggctggtgggcgcctgcctttgccttgtgatgctcttcctgaggag
gacgaagggtttccttgtgtctttattaatgcttctgcagagaacctgagcacagaggtc
agcctgctggagctgatcggagaccccccgccagaggagatcctcaagatctatggcccc
gacaacaaccccggctacgtctttggccccaatgccaacacgggccaggtggcccggtac
cacctaccaaaccctttctaccgggacttttccctcctgttccacatccagcccaccacc
ccccgcgccggcgtgctctttgccatcacggactcctcgcagagcatcatctacatgggc
gtcaagctctcggagctgcgggcgggcaagcagcaaatcatcttctactacacagagccg
ggctcaccggcctcctacgcggcagccaccttcaccgtgcccaccttgctcaaccagtgg
acgcgctttgccatcagcgtggaggaggatgaagtcattctctacctggactgtgaggaa
cacgagcgggtccgcttcgagcgctccccggatgagatggagctggaagatggttccggg
ctctttgttgctcaggctggaggggctgacccagataaataccagggggtgatcgctgat
ctgaagctgcgaggggacccgcgggcggccgagcgccagtgcgaggaagaggaggatgac
accgaggaggtctcaggtgattttggcagtggggcagaaggtggacaccaacccttggag
aaggacaggagtgttccagggctggtggatgctgtccctgtcacctctccccccgtggca
gcgggtgggggatcgaggagcggcgggggctccccacagcaagccgagaggacccgagtg
gaggagacgctgcaggtctctgctggaggcgctggtcccaaaggcgaaaagggggagaag
ggcgagcgcggcctgaaaggggacacagggaccagcggcatcgtggggacgggcagtgtc
aagggtgaaaagggagagaagggagaactgggcgttaagggcagtgctgggtttggctac
cccggttctaagggccagaaaggggaaccaggcgaccccggcccccccgggaccccctca
cggcacgccgacggctcggtggtggagcaggtcaccggtcccccggggccaccagggaag
gacggagcccctggcagggacggcgagcccggcgatcccggcgaggacggcaaacctggt
gatgtgggaccccaggggttccctgggacaccaggacagcctggtatgaagggggagaag
ggtgacccaggcgtgggaccgaggggaccccctggaccacccggtcccccaggaccacca
ggaccttcattcgagcatgacaagctgaccttcatcgacatggagggctctggctttggt
ggtgacctggagaccttgcggggtccgcggggaccacccggtcccccagggccccccggt
gtgcccggtttgccgggggagccgggacgctttgggatgaaccgcacagacctgccggga
ccaccagggctgccgggcagggacggggcccccgggcctccaggaccagtgggtcctcaa
ggtcctcctggaagagatggggtggctgggcagccaggacccaaaggagagcagggtgat
gtgggtgacctcggcctccccggtgcaccaggacccaagggcagcaaaggagaaatggga
ccagcaggacctccaggagagatgggattagctggtcttcctgggcccatcggaccccga
gggcagccagggccccccggtcccccgggaccaccaggactgggctacgaggctggattt
ggtgacatggagggctcggggctgccattcgctgccagctcccccggaccacccggacct
gaaggaccacagggtgtgccaggactgccagggttgaagggggaggttggcagccctggg
cagcctggcccaccaggaccaaagggagacgctggcgtgcctggtgtggatgggcgccct
ggcctggagggcttccctggaccacagggacccaaaggtgacagaggcagccctggcgag
aagggtgagcgaggacaagatggggtggggctacccggcccccctggtccacccggtccc
cctggacaggtcatctccgtctcgagtgaagatcagactttggcagctgtgcccggtcca
gagggcagaccaggacacgctggcttcccgggcccagtgggaccaaaaggagatcggggg
ccatctggtcctcagggacccccagggttgaagggggagaagggagagcccggcgtcatc
atcagccccgacgggaccgtggtcactgcgaaggggaagggagagaagggggagcctggg
ctgcggggaccggtgggaccctcgggtccccagggacgagcagggatgaaaggagagatt
ggctttccgggcagacccggacgtcctggcatgaacgggctgaagggtgagaagggggac
cctgcggatgtcaccagcgtgctgggcttgcggggtccgccaggacccccaggtccccca
ggtccccccgggccacccggcagcgtagtctacgacagcagcaatgctttcggtgactcc
agccatcctgcgctgccagccttccccggttttcaccagttcccaggacaaaagggagag
aaaggtgacgtgggagccccgggacccccaggccactttccctacgacccgagtcacttt
ggtgccaccctgcggggtgacaagggcgaggcaggtcccaaaggggagaagggtgagcca
ggcagcaccccgctctacggtgctggcatctccgggctgccaggccctccaggaccccag
ggctaccccgggctgccgggtcccaagggggacagtatcgttgggccaccaggacctccc
ggacctcagggcccccctgggatcggatacgaggggcggcagggcccccctggccctcct
ggaccccctggtccaccctccttcccagggccccacagacaagctatcagcatccccggt
ccccccggaccaccgggacctcctggaccaccaggcaccagcgggacgtccttggggctg
cgtgccatgccaacgtaccaggccatgctgagcgctgcccacgagctgcccgagggcggc
ctcgtcttcctaagcgaccggcaagagctctacgtgcggctgcgcgggggcttccgccgg
gtgctgctggaggagcacaacctgatccccagctcagctctggacaacgaggtgtatgac
aagccccccagcgtccactacgccggcccccagccccctctccagccccgtggacccctg
caccccctccgcaaccacagccccccacccaccgcccgtccctggcgtggggacgaggtg
gtggccaaccagcaccgcctgcctgagcaacctctgctccaccaccagcacgagctcctc
aacagctactacatccaccgccggccggatccggcccccgtggctgcccacgtccaccag
gacttccagcccgccctccacctggtggccttgaacgccccgttgagcggtggcatgcgc
ggcatccgcggcgccgatttccagtgcttccagcaagcccggcaggtcgggctggccggg
accttccgcgctttcctctcctcccgcctccaagatctctacagcatcgtgcgccgggcc
gaccgcgccgccgtgcccatcgtcaacctccgggacgaggtgctcttcagtaactgggaa
gctctgttcacgggcagcggggccccgctccgcgccggcgcccgcgtcctctccttcgac
ggccgggatgtcctgcgggatgcgggatggccccagaagagtgtctggcacggctcagat
gccaagggccggcgcttgcccgagaactactgcgaggcgtggcggacggaggagcgcacc
gccaccggccaagcgtcttcactggcctctggcaagctgctggagcaggtggctagtagt
tgccagcagaccttcatcgtcctctgcatcgagaacagcttcatgactgccgccaaaaag
tga
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