KEGG   Caprimulgus europaeus (Eurasian nightjar): 306723784
Entry
306723784         CDS       T11931                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ceur  Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur04382  Cornified envelope formation
ceur04510  Focal adhesion
ceur04512  ECM-receptor interaction
ceur04518  Integrin signaling
ceur04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ceur00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    306723784 (COL4A1)
   04518 Integrin signaling
    306723784 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    306723784 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    306723784 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    306723784 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ceur04147]
    306723784 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:ceur00536]
    306723784 (COL4A1)
Exosome [BR:ceur04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   306723784 (COL4A1)
Glycosaminoglycan binding proteins [BR:ceur00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   306723784 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 306723784
NCBI-ProteinID: XP_079055906
LinkDB
Position
1:<64187942..>64324006
AA seq 1669 aa
MRLWLGFGLLLSAELSAVSAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG
PPGPPGLKGDTGEPGLPGTKGTRGPPGVSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKG
ERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGSP
GFQGPMGPQGPPGEPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHMK
EKGSEIIRGEKGDPGEKGERGVPGIPGSGFKGEKGEPGKPGPRGKPGKDGEPGPKGEPGL
PGGFGIPGRPGEPGTKGDKGERGFPGPPGRVIDPGPVDTFGEKGEPGVSGLPGLKGQKGE
KGFPGIQGIPGPPGRPLPDRVGSPGVPGERGEKGEKGSPGFSLPGPPGRDGFPGPPGLPG
PPGPPGKTDGIDQCQQGEPGAPGSPGLPGRDGFPGEMGEKGDKGEACALCDKVGPPGLPG
PQGPPGPSGFPGQSGFKGDRGLPGLDGLPGVPGPPGTPGLMGSPGAKGEPGDFSYDTILK
GEKGDPGFPGQPGIPGREGRPGKDGLPGLQGPKGASGTAGLKGERGPPGQPGFPGVRGER
GFPGPPGIGAAGLPGEKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFP
GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDG
LPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGSPGLPGLRGEQGFPGIPGQQGF
RGDPGLPGLQGLQGPPGAPGLGPQGTPGPAGQPGPQGPPGFPGIKGERGFPGIPGLDMPG
PKGDKGSQGQPGVPGSVGLPGLPGPQGAVGLKGSAGPKGEMGVMGTPGLPGTPGPVGDRG
FPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEKGDHG
ATGEKGLRGEYGEPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGLPGQKGSVGEMGLPG
TPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGSPGEKGEPGRTGSPGLSGD
KGEKGSSGMPGIPGAPGPKGSPGMAGFPGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGV
PGPAGSIGQKGEPGYDGIPGAAGAKGEQGIPGRGLPGFPGAKGDKGAKGDVGFPGSPGSP
GIPGLKGEPGYAGPPGPKGSQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG
LKGAKGEQGSNGWPGTPGSPGVKGDPGFQGLPGSPGLPGDIGQKGDLGPPGVPGVPGPKG
SPGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLVKGDPGLPGPVGPVGLKGFPGLPGPK
GQQGVTGPSGVPGPPGSPGFDGKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAMGPPGAP
SVAHGFLVTRHSQTTEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCSVCEAPAMVIAV
HSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgcggctctggctgggcttcgggctgctgctgagcgccgagctcagcgccgtgtctgcc
gcgggttgttccggttgcggaaaatgtgactgcagtggagtgaaagggcagaagggagaa
agaggcttaccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt
cctcctgggccaccagggcttaagggtgatactggagaaccaggactaccaggaacaaag
ggaacaagaggccccccaggagtatcaggctttccaggaaacccaggccttcctggcatt
cctggacaagatggccctcctggtccacctggcattccaggatgtaacggcacaaagggt
gaaagaggtccagtaggtcccccaggtttaccaggactgactgggagcataggaccccca
ggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagtgtg
ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaagtcca
gggtttcagggaccaatggggccacaagggcctccaggagaaccaggtcccccagggcca
ccaggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaa
aagggagaacaaggagtaagaggccccccaggcccaccaggaccagcaccacatatgaaa
gaaaaagggagtgaaatcataaggggagaaaagggtgatccaggtgaaaagggtgaaaga
ggcgtcccaggaattccaggctcaggtttcaaaggagaaaagggtgaacctgggaagcct
ggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaacctggttta
cctggtgggtttgggattccaggacgacctggggagcctggtacgaagggtgacaaaggt
gaacgaggatttccaggacctccaggaagagttatagatcctggaccagtagataccttt
ggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcagaaaggtgaa
aaaggtttccctggtatacaaggaatcccaggacctccaggtcgaccacttccagacagg
gtaggatcacctggtgtccctggagagagaggtgaaaaaggtgaaaagggttctccagga
ttctctttacctggaccccctggaagagatggtttcccaggtcccccaggattgcctggc
ccaccaggtcctccaggcaaaacagatggaattgatcaatgccagcagggagaacctggt
gcaccaggtagtcctggacttccaggaagagatggatttccaggagagatgggagagaaa
ggtgacaaaggtgaagcctgtgccttatgtgataaagtaggacctcctggacttccagga
ccacaagggccaccaggtccatcaggttttccagggcaatcaggtttcaagggtgacaga
ggcttacctggacttgatggccttccaggggtacctgggccccccggcactccaggactt
atgggcagccctggggcaaaaggagaaccaggagatttttcttatgatactatcctgaaa
ggtgaaaagggagatcctggtttcccaggacaaccagggattcctggaagagaaggaaga
ccaggaaaagatggattgccaggtctccagggtccaaaaggagcatcgggtacagctggc
ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga
ggttttcctggccctcctgggataggtgctgcagggttacctggtgaaaaaggagacaga
ggctttgctggaaccccaggtttaccaggccttccaggagcaaagggtgaagcaggacga
actgtaccgctccccggacctcctggggcagatggccttcctgggccacctggtttccct
ggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggcctgccaggagaa
aaaggtgctgttggacagccaggtatagggttccctggacctccaggacccaaaggtttc
caaggtcaacctggctcacctggtctgccagggactccaggaacccctggcctggatggt
ttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgtaggtctccctggc
cctaagggattgccaggccccccaggaccagctggcattcctggagaaaagggaagtcca
ggactgcctggcttacgtggcgagcaaggctttccgggcataccaggacagcaaggattc
agaggcgaccctggcctcccaggactgcaaggcttgcagggccccccgggcgcaccagga
ctgggccctcagggcacaccaggacccgctgggcagccaggaccccagggaccgccagga
tttcctggaataaaaggagaaaggggtttccctggtatcccaggtctagatatgccagga
ccaaaaggggataaaggtagccagggccagcccggcgtaccagggtctgtggggttacct
ggcctgccgggtccacagggggctgttggactgaaaggatcagcagggccaaaaggagaa
atgggagttatgggaactcctggattaccaggaactcctggaccagttggagatcgaggg
tttcccggtgaaaaaggtagccaaggtttcaaaggcgtagttggaccacagggtgatcct
ggtgtcaaaggagataaaggtgaagccggtctcccaggaaaacctggaacgatggacaat
atggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaaggggaccatgga
gcaacaggagaaaaagggttacgtggggaatatggagaaccaggaattccagggaaggat
ggtgaacctggtacgccaggacatccaggaccaaaaggtgatcagggccccccagggtac
ccaggtgatccaggacttccaggacaaaaaggatcggttggtgaaatgggtttgccagga
acacctggagaaaagggtctgccaggagtaccaggttcaccaggcacaccagggttccct
gggcaaaaaggtgaaaaaggagacaaaggagcaccaggttttcctggaattggctttccg
gggtctcctggtgagaagggagaaccaggaagaacaggtagtccaggtttatccggagat
aaaggtgaaaagggtagttcaggaatgcctggaatcccgggtgccccaggtcccaaagga
tcccctggcatggcaggatttccaggcaaccctggccgccatggagaaaagggtgaaaaa
ggacttcctggcttaagtggcattccaggtttaaaaggagaaccaggtgaacctggtgtt
ccgggtcctgctggttccattggacagaagggtgaaccaggttatgatgggattccaggt
gcagctggtgcaaagggggaacaaggtatcccaggtagaggacttccaggatttcctggt
gcaaagggagataaaggtgcgaaaggtgatgtgggttttccaggatccccaggaagtccg
gggatcccaggcctgaaaggagaaccaggatatgctggtccaccaggccctaagggcagc
caaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagacagaggaccc
caaggccaacctggccttccaggtttaccaggtccaacagggccaccaggacccccagga
ctgaaaggagccaaaggtgagcagggaagcaatggctggcctgggactcctgggagtcca
ggagtcaaaggtgatccaggtttccagggactgccgggtagtcctggtttaccaggagat
attggtcaaaagggtgatctgggacctccaggagttccaggcgttccaggtccaaaagga
tctcctggcttcccaggccttaagggtgagcggggtgaccaaggtcttcctggatctaaa
ggtttacaaggcccaccaggcccgccaggtgcttttcaacttgttaaaggagatcctggc
ttacctggccctgtaggaccagttggtctcaaaggattcccaggacttccaggtcccaaa
ggacagcaaggggtgacaggaccttcaggtgtacctggaccaccaggtagtccagggttt
gatggtaaacctgggcaaaaaggagaagttggtccttatggtcccccaggacccagagga
ttccctggtccacctggccctgaaggtttgcctggggctatgggcccaccaggtgcacca
tctgttgctcatggcttccttgtcaccagacacagtcaaaccactgaagaaccatcgtgt
ccttttggaacaaggctgatttaccacggctactccttgctttatgtacaaggcaatgaa
agagcacatggccaagatctgggcacagctggaagctgtcttcgtaaatttagtaccatg
cctttcttattctgcaatatcaacaatgtatgtaactttgcctcaaggaatgactattcc
tactggctgtccactcctgaacccatgccaatgagtatggctcctatcactggtgataat
atcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatggtaatagctgtt
cacagtcaaacaattcaaataccaccgtgtcctgaaggctggagttcactttggattggt
tactcctttgtcatgcacaccagtgctggtgcagagggctctggccaggccctagcgtct
cctggttcctgcctagaggagtttcgaagcgctcccttcattgaatgccatggccggggc
acctgcaattattatgcaaacgcttacagcttctggcttgccactatagagaggaatgag
atgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctcaaatgttagc
cgttgtcaagtctgtatgagaaaaacataa

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