Caprimulgus europaeus (Eurasian nightjar): 306724977
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Entry
306724977 CDS
T11931
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur04382
Cornified envelope formation
ceur04510
Focal adhesion
ceur04512
ECM-receptor interaction
ceur04518
Integrin signaling
ceur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
306724977 (COL4A6)
04518 Integrin signaling
306724977 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
306724977 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
306724977 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
306724977 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ceur04147
]
306724977 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
ceur00536
]
306724977 (COL4A6)
Exosome [BR:
ceur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
306724977 (COL4A6)
Glycosaminoglycan binding proteins [BR:
ceur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
306724977 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
306724977
NCBI-ProteinID:
XP_079057963
LinkDB
All DBs
Position
14:4748617..>4791301
Genome browser
AA seq
1596 aa
AA seq
DB search
MGVPGFQGINGIPGHPGQPGPRGLPGLDGCNGTTGSPGVSGSDGFPGLPGLPGRPGPKGV
KGEPVFAQGSLKGMKGENGLPGLDGISGPKGFPGPVGSAGPIGLPGLQGPMGPPGPPGPK
GNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGVPGDKGLP
GLPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPGYPGLDGFEGMKGELG
DIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGLPGLPGAPGFPGLEGDGMG
PGGSPGIPGVKGEVGEPGRVMIGLPGPRGRDGLPGLPGAPGLPGSPRPSFPPDTILDGRI
GTPGEPGQRGLPGALGPKGYKGEPGDCACDGGVTRAGLKGISGLPGPSGSPGVPGIKGIA
GDPGTVGAPGLRGPTASAGQQGLPGLKGEKGDLSYATGRGARGDRGATAPRGPSGIPGTP
GRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGIGYPGPSGVRGLPGD
PGMDGFPGQAGLPGAPGITLPCIVPGAYGPPGTPGFSGLPGPKGSKGFPGIPGQPGLHGS
KGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGAKGAPGDVFG
AESGALGDRGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGDPGYSGVPGLRGPP
GPGGPFGIKGKPGPLGSVGLTGAPGLPGAKGLTGDVGPQGPAGMKGFPGLDGAPGSPGER
GFLGPPGPFGQDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTAGEKGSP
GIVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSA
GQPGLPGAAGSASKERGLPGDLGFPGPSGQPGLPGQKGTHGIIGFPGMPGERGSDGITGT
LGLPGSVGLPGPKGDQGETIGIPGIAGAKGEQGDPGFPGERGREGLKGEPGYPGNTGVNG
LKGGPGDLGQEGPAGIPGNAGLRGVPGPPGPPGQPGSVGFPGARGTAGPKGFPGFPGLNG
LNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGLGRGAVGFPGPKGSSGDMGPPG
PVGLPGLPGTPGASLPSDIRGRPGDAGVPGTDGSSGLPGPPGPPGPPGPAADQGDTGNPG
FPGVLGFRGIKGDVGPTGPVGLPGASGFKGIRGEPGLMGMPGKDGPPGDPGYPGLKGETG
RRGLPGRQGAPGITPQPEEVTAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRS
GLKGRDGLPGSPGIAGDPGPSGAPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQ
SDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYY
ASRNDKSYWLSTTAPIPMMPVDSGEIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWR
SLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLT
TVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccaggatttcagggcatcaatggaatcccaggtcaccctgggcaacctgga
cctagaggtctgcctggcctcgatggttgcaacggtaccactgggagccctggtgtttct
ggatcagatgggtttcctggcctacctgggctgcctggtcgtcctggcccaaaaggtgtt
aaaggagaacctgtttttgctcaaggcagtcttaaaggaatgaagggagaaaatggcctt
cctggattggatggaatttctggcccgaaaggttttccaggtccagtaggctctgcaggc
cctataggattaccaggtttgcagggtccaatgggtcctcctgggccgccaggtcccaaa
ggtaacatgggattaggctttcaaggagagaaaggagaaaagggtgatgtagggctgcca
ggccctccaggtcccccaccatccactggaatacttgaattcatgggatttccaaaaggg
aaacaaggagaaaagggtgaaccaggccctcaaggagtccctggagacaaaggattgcct
ggcctgccgggctttggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttacct
ggtggcaggggtcttttgggacttgatggatctgatgggattccagggagaaagggtcat
ccaggtattcccggctatccaggactggatggatttgaaggcatgaagggtgaattaggt
gacattggtcccccaggtcctcctatcgttattgacagggaaggtgtagtcatttcaggt
gccccgggtgaccctggaaacccgggaatacctggtcctccaggagatgaagggatcagt
ggtttaccaggccttccaggagctccagggtttccaggcctggaaggagatggaatgggc
cctggaggatctccaggtattccaggtgtgaaaggtgaagtgggagaaccaggaagagtg
atgattggattaccaggccctcgtggcagagatggcttaccaggtctgccaggagcaccg
ggattgcctggctcaccacgcccttcatttcccccagacacgatcctggatggaaggatt
ggcaccccaggggagcctggacaaagagggcttccaggagctttgggtccaaagggatac
aaaggagaaccaggtgattgtgcttgtgatggaggagttacaagagctggtctaaaaggc
atctcaggtctaccaggtccatcaggaagccctggtgtgcctgggattaagggcattgct
ggagacccaggcactgtgggtgcaccaggactgcgaggccctacggcttcagctggtcag
caaggtcttccaggccttaagggagaaaaaggggatttgtcctatgcaacaggcagaggt
gctcgtggggaccgtggtgcaacagcacccagaggaccttcaggcatcccaggaacccct
ggcagggatggacttccaggcttgccaggcccaccaggccctccaggtgatggtgggctg
ggtttcccaggtgaaaaaggactgccaggattacctggctccaagggccatcgtggagaa
actggttctcctggcattggatatccaggtcctagtggagtccgtgggctgccaggtgat
ccaggaatggatgggtttccaggacaagcaggtcttccaggcgctccaggtatcaccttg
ccctgcatagttcctggagcatatgggcccccagggactcccggcttttcaggattgcca
ggtccaaaaggcagcaaaggctttcctggcattccaggccaacctggattacatgggtca
aaaggacagccagggtctccaggaataataggcttgcaaggggaacctggcttccctggg
cctcgaggagagcaggggtcacaaggacttccaggactggacggaacagatggtttgcct
gggaaaatgggtgcttcaggcttagctggagcaaaaggagctcctggagatgtattcggt
gctgagagtggagccctgggagaccgtggccgacctggactcccaggtgataaaggactt
acaggtgatcttggatttccaggaccaaaagggttagatggaagaccaggcctcctaggc
attaaaggcgaacagggtgatccaggatattcgggtgtccctggattgcggggtcctcca
ggtcctggaggtccttttggcattaagggaaaaccaggacccttggggtcagttggcctt
acaggagcaccaggactccctggagccaaaggcttgactggggatgtaggtccacaaggc
cctgctggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaaga
ggattcctagggccacctgggccttttggtcaagatggacgtccaggtttctctgggcca
aaaggcgagaaaggttcttctggcctgcttggtttccctggcatgccaggcctgcctggt
gtccctggcgtgaatggatttaaaggaactcctggcacagctggagaaaaagggagccct
ggcattgtgggactccaaggtcaaaaaggtgacagaggtgatgtgggtccccctggtctt
cctgttcttggacctccagaacaggcactgcaattcaaaggagacaaaggagatcctgga
ttagctggacttggagggttccctggacctagaggtgataaaggaatcccaggaagcgct
ggacagcctggtctccctggtgcagctgggtcagcaagcaaagagagaggtcttcctggt
gacttaggcttccctggtccatctggacagcctggtctgccagggcagaagggtacacat
ggtatcataggatttccaggaatgccaggagagaggggttcagatggtatcacaggaaca
cttggattgcctggatctgttggcctccctggtccaaagggtgaccagggagagactatt
ggcattcctggcattgctggagcaaaaggagagcaaggggacccagggttcccaggagag
agaggcagagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaatgga
ctcaaaggtggcccaggagatcttggccaagaaggaccagcaggaatccctggaaatgct
gggctgagaggagtccctgggccaccgggacctccagggcagccaggatctgtcggattc
ccaggagctcgtggaacagcaggacctaaagggtttcctggatttccaggtttaaatggt
ctgaatggcttgccaggcacaaaggggtctcctggaacaccaggtctgagtgaagctgga
ctgaaaggccctgcaggtctcccaggtccaaagggtgaagaaggttctccaggcttgggt
agaggagctgtaggattccctggaccaaaaggctcatcaggagacatgggtccccctggt
cctgtgggactgcctggcttgccaggaacacctggagcttctcttccttctgatatacgt
gggagacctggggatgctggcgttccaggaactgatgggagttcaggtcttccaggtcct
ccaggaccaccagggccccctggcccagctgctgaccaaggtgacacaggaaatccaggt
ttccctggtgttcttggctttagaggcattaagggtgatgtgggacccactggtccagtt
ggactgcctggagcatctggattcaaaggtataagaggagagcctggcctcatggggatg
ccaggtaaagatgggcctccgggggatcctggttaccctggcctgaaaggtgaaacgggc
cggcgaggtctccctggccgacaaggggctccaggtataaccccacagccagaagaagtc
acagcccctgcaggcttacctggtttgccaggtattgatggtgtccctggctttgatgga
gatcctggattccagggcccagctggaaaaccaggtacaaaagggctgccaggaagatct
ggtttgaaaggacgtgatggtttacctggatcacctggcatagctggggatccaggacct
tcaggtgccccaggaccacaagggtttgaaggtgttgctggaaagccgggctcgcttggt
ttgccgggaatgcctggccggagcgtgggcgttggatacactttagtgaagcacagtcag
tcagaccaaatcccaccttgtcccatagggatgaataagctctgggatggctacagcttg
ttgtatgtggaggggcaggaaaagtcacacaaccaggatctcggttttgctggctcgtgt
ttgcctcgcttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactat
gccagccgcaatgacaagtcctactggctctccaccactgctcctatccccatgatgcca
gtggacagcggcgagatcccccagtacatcagtcgttgctcagtatgtgaagcaccttca
caggctgtggctgtgcacagccaggacatcaccatcccacagtgtccccttggctggcgc
agcctatggataggatactccttccttatgcacactgcggctggtgccgaaggcggaggt
cagtccctcgtctcacctgggtcctgcctggaggatttccgtgctaccccgttcattgag
tgcaacggtgccaggggaacgtgccactactttgcaaacaagtacagcttctggctgacg
actgtggagcagtcacagcagtttgtcagtgctcctccctcagagactctgaaagcagga
cagctccgaacgagggtcagccgctgccaagtctgcatgaagaacttgtag
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integrated database retrieval system
