Caprimulgus europaeus (Eurasian nightjar): 306725027
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Entry
306725027 CDS
T11931
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform 1
KO
K12879
THO complex subunit 2
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03013
Nucleocytoplasmic transport
ceur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306725027 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
306725027 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceur03019
]
306725027 (THOC2)
03041 Spliceosome [BR:
ceur03041
]
306725027 (THOC2)
Messenger RNA biogenesis [BR:
ceur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
306725027 (THOC2)
Spliceosome [BR:
ceur03041
]
Complex C
Other components
EJC/TREX
306725027 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
306725027 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
306725027
NCBI-ProteinID:
XP_079058042
LinkDB
All DBs
Position
14:6461100..6509812
Genome browser
AA seq
1652 aa
AA seq
DB search
MERRAPSPRVRRVRVPACLAGRCVPSDPGPLLPHPGSRRHTGKMATLLPAEWIKNWEKGG
KSEFVQLCRALSENRSLDNTGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDM
PSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLI
GCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSG
ETPPSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSS
EKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIA
VALCQLVHVTIEPLYRRVGVPKGAKGSPIPSLPNKRAPKQADSFEDLRKEVFNMLCYLGP
HLSHDPILFAKVVRLGKAFMKEVGTMKKFVSDRMVKFQSDGSKQEDKEKMEILFSCLLSI
TDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTI
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTS
LNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVAN
QLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKV
HKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKL
KVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLA
KSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIY
TVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALER
RVHKICQEEKEKRPDLYALAMGYSGQLKGRKPFMIPENEFHHKDPPARNAVAATVQNGPG
GAAMPTSLTINTVRLEEGTTEETADKLKEKSQGVVKVVNKAVNAAPKVTTSNGNSASNSK
IIKEKEDKEKSGKEKDKEKKDKTPAVAPEMKALGKDGKDKPKEERANKEEKAREIKEKTP
KSDKEKEKVKKEEKALKEEKSKTVVTIVESKSTAEKEREKEPSRERDIAKEMKSKENAKG
GEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYIN
HTTPALSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRK
EENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKES
RHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcgcgcgccgtctcccagggtacggcgcgtccgcgtcccagcgtgcctcgcg
ggccgttgcgtcccctctgacccgggcccgttgctcccccatccgggctctcggcgccac
acggggaagatggcgacgctgctccctgccgagtggataaagaactgggagaaaggcggc
aagagcgagtttgtgcaactatgtcgtgctctcagcgaaaacagaagccttgataataca
ggtttcagagatatccagcaagctttgtatgagcttgcataccatgttgtcagaggaaac
ttaaagcatgatcaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatg
ccatccatcctagctgatgtattctgcatattagatattgaaactagttgtttagaagaa
aaaagtaagagggatcattttacccaactggtattagcttgtttgtatcttgtatctgac
actgtcctaaaggagcgtttagatccagagacactggagtcattagggcttatcaagcag
tctcaacagttcaatcagaagtctgttaagataaagacaaaactattttataagcaacag
aagtttaatttgttacgagaggagaacgaaggttatgcaaagctcattgcagaacttggg
caagacttatctggaaatatcactagtgatttaatccttgaaaatattaaatctttaata
ggatgttttaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgc
aggcctgaatatgacgacttctttgtaccactgatagagtcttacatgtacatgtgtgaa
cctcaaactctgtgccatatccttgggttcaaattcaaattttatcaggatccaagtggt
gagacacctccctctttatacagagttgctgctgtccttttgcaacataatctcatagat
ttggaagatctttatgttcatctgcttccaggggataatgccatcattgaggaacacaag
cgagagatagtggaagctaagcaaattgtcagaaaacttacgatggttgtcttatcctct
gaaaagactgaggaaaaggagaaggaaaaagaaaaggaggaggagaaaaccgagaagcct
cctgataaccaaaagcttggtttattggaagctttattaaaaattggtgactggcagcat
gcacaaagtattatggatcagatgcctccattttatgctacttcacacaagcctattgca
gttgccctttgccagcttgtacatgtgacaattgaacctctgtaccgcagagttggtgta
cctaaaggagctaaagggtcaccaattccttctttgccaaacaagagagcaccaaaacaa
gcagacagctttgaggacttgagaaaggaagtattcaacatgctttgctaccttggtcct
catctctcccatgatcccattttatttgcgaaagtggtgcgccttggaaaagcgtttatg
aaagaggttggaactatgaagaaattcgtcagtgacagaatggttaagtttcagtctgat
ggaagcaaacaagaagataaagagaaaatggaaatcctgtttagctgtttgctgagtatt
accgatcaggtcttacttccgtctctttctctgatggactgcaatgcctgcatgtctgag
gagttatggggaatgttcaaaacatttccataccagtaccggtaccgtctttatgggcaa
tggaagaatgaaacatacaatagtcatccacttctagtgaaagttaaagctcaaaccata
gaccgagccaaatatatcatgaagcgtttaactaaggaaaatgtgaaaccctctggaaga
caaattgggaagctcagccacagcaatcctacaattttatttgattatattttatcacaa
atacaaaaatatgataacttaataactccagtggttgattcactgaaatacctcacttca
ctgaactacgatgtcttggcatactgcatcattgaagctctggcaaaccctgagaaggag
agaatgaagcatgatgacactacaatctcaagctggctgcagagtctggctagcttttgt
ggtgcagttttccgaaaatacccaattgaacttgctggtctacttcaatatgtagccaac
caactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtacagaaaatg
gcaggaatagaaattacagaagaaatgacaatggaacaattggaagccatgactggtgga
gaacaactaaaagctgagggtggatactttggtcaaatcaggaatacaaaaaaatcttct
cagagactgaaagatgcattactggaccatgaccttgcccttccactgtgcctgcttatg
gctcaacagagaaatggtgtgatctttcaagagggaggggaaaaacatctgaagctggtg
ggaaaactgtatgatcagtgccatgacaccctggtgcagtttggtgggtttttagcatcc
aatctaagcacagaagattacattaagcgagtgccttctattgacgttctctgtaatgag
tttcacacccctcacgatgctgcgtttttcctctcaagacccatgtatgcacaccatatt
tcatcaaagtatgatgaactgaaaaaagctgagaagggaaataaacagcagcacaaagtt
cacaaatacatcacatcatgtgagctggtgatggctcctgttcatgatgctgtgatttct
ctgcacctccccaaggtttgggatgacatcagtcctcagttttatgctacattctggtct
ttgacaatgtatgaccttgccgtcccacatagtagctatgacagagaagtcaataaactt
aaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgcacagctcttcaggacaagctccttgaagaggagaagaagcaattg
gagcatgtgcagagggttctacaaagactgaaactagagaaggataactggcttctggca
aagtctaccaaaaatgagactatcacgaagtttttgcagttatgtatatttcctcgctgc
attttttcggcaatcgatgcagtttattgtgctcactttgtagaactggtgcatcagcag
aaaacacccaacttctctacacttctctgctatgatagagttttctctgatattatatat
acagtagcaagctgcactgaaaatgaagctagtagatatggcaggtttttgtgctgtatg
ctggagaccgtgactagatggcacagtgacagagtcatatatgaaaaggaatgtggcaac
tatccaggcttcctaactatattgcgggcaactggatttgatggtggaaataaggctgat
caattggattatgagaattttagacatgtggtacacaagtggcactataaattaactaag
gcttctgtgcactgccttgagacaggtgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagtgctgaacctgggacaagccttggaaaga
agagtacataagatatgtcaggaagagaaagagaagagacctgatctatatgcattggct
atgggctattctgggcagttgaaaggtaggaagcctttcatgatacctgaaaatgaattc
caccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggt
ggtgctgcgatgccaacatctctcacaataaatacagttagactggaagaaggcactact
gaggagactgcagataaattaaaggagaagtctcagggtgtggtgaaggttgttaataaa
gctgtcaatgctgcaccgaaggtgacaacgagcaatggaaacagtgcttctaatagcaaa
attattaaagagaaagaagataaagaaaaaagtgggaaggagaaagataaagaaaaaaaa
gacaagactccagctgtcgctccagagatgaaggcacttgggaaggatgggaaagataaa
ccaaaggaagaacgggccaacaaagaagagaaagcaagagagatcaaggagaaaacgcca
aaatctgacaaagagaaggaaaaagtcaagaaagaagaaaaagctttgaaagaagaaaaa
tccaagacagttgttaccatcgttgaatcaaagtcaactgcagaaaaggagagagaaaag
gagccatctagagaaagagatatagcaaaggaaatgaaatccaaggaaaatgctaaagga
ggagaaaagatgccagtagctgggtccttgaagtcacctgttccccgatcagaaacatca
gaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccatcacattcc
tcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactacattaac
cacactactccagcactgtccaagagtaaggagagagaagtggacaagaaagatttggac
aagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaagatcga
aaaagggatcattcaaacagtgaccgagaggtaccacaggattcaaccaaacgacgcaaa
gaggaaaatgggacaactggttcttcaaagcatagtaaaagtgaaagtccttctgattcc
cctcgcttaaatgaaaaggagaaggagaagaacaaatcaaaatcttcaggaaaagagaaa
ggtgactcaattaaagcagaaaagatggagaagagctcctctggtagcaaaaaggaatca
agacatgataaagaaaaaactgaaaagaaagaaaaacgagacagcactggagggaaagaa
gaaaagaaacatcataaatcttcagacaagcatagataa
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integrated database retrieval system
