Caprimulgus europaeus (Eurasian nightjar): 306726216
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Entry
306726216 CDS
T11931
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ceur03000
]
306726216 (SOX18)
Transcription factors [BR:
ceur03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
306726216 (SOX18)
SSDB
Ortholog
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GFIT
Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
306726216
NCBI-ProteinID:
XP_079059840
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All DBs
Position
17:complement(1878297..1882873)
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AA seq
417 aa
AA seq
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MNISESNYCREEISQPRGDCSWVTSAVPASEPGLTFPRPPGPASPSSRTPSPEPGFAFGP
GPAGAAPGAAPSRSPSPEPGYGYSPPAGRAEGKAGEDSRIRRPMNAFMVWAKDERKRLAQ
QNPDLHNAVLSKMLGQSWKALSASDKRPFVEEAERLRIQHLQDHPNYKYRPRRKKQAKKI
KRMEPNILLHNLSQPCSDNFSMSHHGGSQPGHPQPPPLNHFRELHSMGSDIENYGLPTPE
MSPLDVLEQTEPAFFPPHMQDDCNMMPFRGYHHHHQMEFPQEKCMGRDVAVPYAQTPSHL
ADAMRTPHPSSIYYNQMCSGTQNGLSAHLGQLSPPPEAHHMESVDHLNQTELWTDVDRNE
FDQYLNMSRTRPDASGLPYHVSLSKVTPRSISCEESSLISALSDASSAVYYSPCITG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagtcaaactactgccgagaggagatatcgcaaccccggggcgactgt
tcatgggtcacctccgccgtgccggcctctgagcccgggctcaccttcccgcgccccccg
ggacccgcctccccctccagccgcacgcccagccccgagcccggcttcgccttcggcccc
ggccccgcgggtgcggcccccggtgcggcccccagccgctcgcccagccccgagccgggc
tatggatacagccccccggccgggcgcgccgagggcaaggccggggaggattcccgcatc
cgccggcccatgaacgcattcatggtctgggcgaaggatgagcgcaagcggctggcgcag
cagaaccccgacctgcacaacgccgtgctcagcaagatgctgggccagtcatggaaagcg
ctgagcgccagcgacaaacgtcccttcgtggaagaggcagaacggctgcgaatccagcac
ctccaggatcaccccaactataagtaccgcccaaggagaaagaagcaagccaagaaaatc
aagaggatggaacccaatatcctcctgcataacctttcccagccttgcagtgacaacttc
agcatgagtcaccatggcggcagccagccgggccacccccagcctcccccacttaaccac
ttcagagaactccactccatggggtcggatattgaaaactatggcttgccaactcctgag
atgtctcctttggatgtcttggaacaaaccgagccggcgtttttccctcctcacatgcag
gatgactgcaacatgatgccctttcgcggctaccaccaccatcaccagatggagtttccc
caggagaagtgcatggggcgggatgtggcggtgccctacgcgcagaccccctcgcacttg
gccgacgccatgaggactccccatccttccagcatatactacaaccagatgtgctcagga
actcagaacgggctttctgcccacctgggtcagctctcgcccccacctgaagcccaccac
atggagagcgtggatcacttgaaccaaaccgagctgtggacagatgttgaccgcaatgag
tttgatcaatatttgaacatgagcaggactcgtcccgacgcctcgggactcccttaccat
gtctccttgtccaaagtgactcctagaagtatctcctgtgaggagagcagcttgatatcc
gccttgtccgatgccagcagcgctgtttactatagcccctgcatcaccggttag
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