Caprimulgus europaeus (Eurasian nightjar): 306726434
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Entry
306726434 CDS
T11931
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur04382
Cornified envelope formation
ceur04510
Focal adhesion
ceur04512
ECM-receptor interaction
ceur04518
Integrin signaling
ceur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
306726434 (COL4A2)
04518 Integrin signaling
306726434 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
306726434 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
306726434 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
306726434 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ceur04147
]
306726434 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ceur00536
]
306726434 (COL4A2)
Exosome [BR:
ceur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
306726434 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ceur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
306726434 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
306726434
NCBI-ProteinID:
XP_079060144
LinkDB
All DBs
Position
1:complement(<64043095..>64187216)
Genome browser
AA seq
1714 aa
AA seq
DB search
MDISQLPSARIFVCQDLGLLLILMEVVLSAVKVDAGGKTYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGISGPKGEMGQRGVTGFPGADG
IPGHPGQPGSRGKPGHDGCNGTVGDPGDSGSPGLSGFPGTIGVQGPKGQKGEPYILPPDI
ASRYRGEPGDPGFNGFQGPPGALGVQGPVGPRGERGRPGPPGPPGPQGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGEPGQKGEAGIPGVLYGSEKGEEGVMGF
PGQRGLPGINGFPGLSGERGFPGFDGPPGGYGPRGSKGEPGEIGPPGPVSYFPSRIPRKG
ARGEPGFPGVSGLQGDPGEEGDPGLPGLPGFSDADGDKPGLPGEMGPKGEKGELGSPAYQ
AGSPGFPGKHGTPGLRGPPGPAGSPGALFGLKGQEGTPGRFGMQGFPGIRGQKGPKGEEG
DCSKCLLDEELRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGLPGYPGAKGFSGQAGF
PGPKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDTLRGFP
GDPGYPGELGPKGFPGEAGLPGEGFHGPKGYQGPPGDRGQDGNPGPPGLPGLPGEPGQLD
CGQVIEDFSRGDGTEPIWSGAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGYPGL
NGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAAGLKGFPGDALG
AAAGSRGDVGLPGFPGLKGMPGDQGVPGIRGADGSPGLPGPKGDPGPQGLPGLMGLPGTP
GTRGFPGLPGNPGPVGGPGPQGPIGPPGARGEDGEQGFPGPVGLKGLSGDKGETGYPGLQ
GIPGVTGPPGISGMDGFPGDKGTRGSPGIDGFKGMTGLKGRPGIKGIKGEPGLFGSQGDK
GSQGARGFKGDRGDQGPPGEPPKLKPSMMMEVKGEKGDAGERGTKGFFGLKGHKGMPGIP
GKTGTPGSPGHPSYVAGVKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGVRGEKGIPGI
SGHLGTPGSYGEIGERGDTVNLPGMPGLKGEVGVPGLTGTRGSAGQKGEGGDPGFPGIEG
LKGTQGVPGSLGQEGLPGLVGPPGQQGSPGTPGFKGEKGTPGWPGLPGQAGVPGLRGISG
LHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVQG
PFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQTG
VSGQIGLKGSRGDPGPAGTPGVRGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRG
LTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGNTGPQGSPGDMGPQGPPGDPGFRGSPGDP
GLQGRGGIPAPPGSRGEQGATGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHSQ
SDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDTCYY
ASRNDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWR
SLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLT
TIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccagtgcacgtatttttgtttgtcaggatctggggcttctg
ctgatcttgatggaagtcgtgctgtcagccgtcaaagtggatgctggtggaaagacttac
acaggaccgtgtggaggaagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggtcaacccggactccttggatcacaggggttcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatatccaggaata
agtgggcccaaaggagaaatggggcaaagaggagtcactggattccctggggcagatggc
attcctggtcatccagggcagccaggatcaagggggaagccaggtcatgatggctgtaac
gggacagtaggtgatcctggtgactcaggaagtcctggactctctggtttccctggtacc
attggagtccaagggccgaagggccagaagggggagccctatatactgccaccggacatc
gcaagccgatacaggggggaacctggggatccagggttcaatggttttcaaggacctccg
ggtgcactgggtgttcaaggacctgttggtcccagaggagagcgaggaagaccaggacca
ccagggcccccaggaccacaaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggccccccgggtcctccaggtccacctgggcttcctacaagagaactg
atgggggtcccctctgacaaacacaagggtgagagaggagaacctggacaaaaaggggaa
gctggaattccaggtgtactctacggtagtgaaaaaggtgaagaaggagtaatgggcttc
ccagggcaaaggggactgcctggcatcaatggctttccaggactcagtggagaaagaggt
tttccaggatttgatggtccaccaggtggctatggtcctaggggaagcaagggggagcca
ggcgagatcggtcctccaggaccagtttcctattttccttcccgcatcccaaggaaaggt
gcaagaggtgaaccaggctttccaggtgtttctgggctacagggagacccaggagaggag
ggagatcctgggctgcctggtcttcctggattctctgatgcggatggggataagccaggt
ttacctggagaaatgggaccaaaaggtgaaaaaggtgaattaggatctcccgcttatcag
gccggctcacctgggtttccgggtaagcatggcacaccaggactccgtggtccacctggt
cctgctggatccccaggtgctctgtttggattaaaaggacaggaggggacaccaggtaga
tttggcatgcaaggtttccctgggataagaggacaaaaaggacctaaaggcgaagaaggg
gattgcagtaaatgccttttggatgaggaattgagaaggggctctactggcccccctggc
cctcctggctttccaggaacccctggccagcctgggaggaaaggagaacctggtgatcaa
ggaccgcatggtcttcctggctaccctggagcaaaaggattttcaggtcaagctggattt
cctggaccaaaaggagaaaaaggagattctttacacataactactaaaggcaccaaagga
atccgaggagatcctgggctgcctggtatcagaggtgaagatggtttcccaggcagagat
ggattagatggtttaccaggacagcctggccttccgggtgatactctcagaggtttccct
ggtgatcctggttatccaggtgaattaggtccaaagggctttccaggagaagcaggcctg
ccaggtgaaggatttcatggtccaaaagggtaccagggtcctccaggtgaccgtggacaa
gatggaaacccaggacctccagggctgcctggtctgccaggagagcctggccaactagac
tgtgggcaagttattgaagacttttctagaggagatggaaccgagccaatatggtcaggc
gcgggctgtgtgaggccaccaaagggatcccaaggcaagccaggactgccaggagccaca
ggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtaggatacccagggcta
aatggtacacggggtgatccaggtcgggaaggattcccaggtcctccaggttttactggg
cccaggggagacaggggcccgaatggtcttcctggactgcagggacacccaggccttaca
ggaaaatctggtgctccgggagcagcaggactgaagggctttcctggtgacgctttggga
gctgcagcaggttctcgaggggatgtcgggctccctggtttcccagggttgaaaggcatg
ccaggagatcaaggagtaccgggaattagaggagcggatggtagcccaggtttgccagga
cccaaaggagatccaggtccacaaggtctccctggtttgatgggattgccaggaacacca
ggaacacgtggattcccagggctaccaggaaaccctgggccagttggcgggccgggccct
caaggacctattggtccacctggtgccaggggagaagatggtgagcaaggttttcctggc
cctgtgggcttgaaaggtctgtctggtgacaaaggtgaaacaggctacccaggattgcaa
ggcatacctggggtgactggtccccctggcataagtggaatggatggctttccaggagat
aaaggcacaagaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaagga
agaccaggcatcaagggaatcaaaggagaacctggcctgtttgggtctcagggagataaa
ggctcacagggcgcacgtggctttaaaggtgaccgtggggatcaaggccccccaggagaa
cccccaaaactcaagcccagcatgatgatggaagttaaaggtgaaaaaggagatgctgga
gaaaggggcacgaaaggattctttggcttaaaaggtcacaagggaatgccaggcattcct
ggaaaaacaggaactccagggtcccctgggcatcccagctacgtggccggtgtgaaaggg
gacatcggcgcaaaagggctgacaggtctgaaagggtatcctggtccagctggctctcct
ggcatcagaggcttccctggcagcacaggagtcaggggagaaaagggtatcccaggaatt
tcaggccatttgggtactcctggctcatatggtgaaataggtgagcggggagatactgta
aacttaccaggaatgccaggccttaaaggggaagttggtgtgccaggcttaacaggcaca
agaggaagtgcaggacaaaaaggtgaaggcggtgatcctggtttccctggcattgaaggc
ctcaagggcacgcagggtgtccctggctctctgggacaggaaggtttgccaggactggtt
ggccccccagggcagcaaggaagccccgggacgcctggatttaaaggtgaaaagggaact
cccggctggcctggcttaccaggacaagcaggcgtgcctggcttaagaggaatcagtgga
ctgcatggtttaccgggcaccaagggcttaccaggatcaccaggtccagatggctacggc
tctgcaggtttcccaggtgcagtgggtgacaaaggggaagcgggagagccgagcagagtg
gaaggcagccgaggacctccaggacagaagggagacagaggtgttccaggagtccaagga
ccctttggcattcctgggcaggaaggatttccagggcctcctgggatttcaaatatatca
ggatatcctggtgataaaggctccccaggtctagacggagtgccaggctatccaggacta
caggggcagcctggaataccggctccaccaggaagcaaaggagaaagtggacaaacaggt
gtgagtggacaaattggcctaaaaggaagcagaggtgatcctggaccagcagggacacct
ggagttcgtgggtaccctggaccaaaaggtcgtaagggtgaacaaggtgtcatcggcttt
atgggcacagtaggatttccaggtgatttgggacctatcggacccaagggggatagagga
ctaactggctttcagggccctccaggctctcctgggctgccccctcttcctccaaggctg
gttgctgagcaaggttcaccaggtccccggggaaatacaggacctcaaggaagcccagga
gatatgggacctcagggtccaccaggcgatccaggtttcagaggctcacctggagaccca
ggactccagggcagaggtggcattccagctcctcccggctccaggggtgaacaaggcgca
acagggtttcaaggtccggtgggatttgaaggtcagccaggccgccctggtagccccggg
ctgccagggatgccgggtcgcagcgttagcatgggctacctgctggtgaagcacagtcag
tcggatcaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagcctg
ctgtactttgaaggacaagagaaagcacacaaccaggatctagggctggccggctcatgt
ttggctcgtttcagtactatgccgttcctctactgtaaccctggggatacttgttattat
gcaagtagaaatgataaatcctactggctctcaactacagcacctcttccaatgatgcct
gtggcagaagaagacattaggccatatatcagtcgctgctcagtttgtgaggccccagct
gtggcaattgctgtccatagccaagaagcttctattcctcattgccctgaaggctggcgc
agtttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggtggagga
cagtcgctggtttctcctgggagctgcctggaagatttcagagcgactccattcatcgaa
tgcaacggcgcacgcggaacctgccactactttgcaaataagtacagcttctggctcacg
acaattgaccagcccttccaaagcaagccctcagcagatacactcaaggcaggactcatc
cgaagccatatcagcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
