Caprimulgus europaeus (Eurasian nightjar): 306726770
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Entry
306726770 CDS
T11931
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 isoform 1
KO
K13174
THO complex subunit 5
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03013
Nucleocytoplasmic transport
ceur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306726770 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
306726770 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceur03019
]
306726770 (THOC5)
03041 Spliceosome [BR:
ceur03041
]
306726770 (THOC5)
Messenger RNA biogenesis [BR:
ceur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
306726770 (THOC5)
Spliceosome [BR:
ceur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
306726770 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
306726770
NCBI-ProteinID:
XP_079060686
LinkDB
All DBs
Position
18:1771852..1790515
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AA seq
691 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRGKGDADQDVRYYSEECEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYREAPAEISRPAITL
SEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVL
HLTFYYLMNLNIMTVKAKWPPQGDAETGLLLINLFPPPASDLLSPDSILNCLYPGDHGRK
TPNPANQFQFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHM
ELTVKLLRSRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWAAIPYADYAE
LPYTKDVIESSLAEDTHLYYMALIERGTAKLQAAVVLNPGYATLPPIFSLCLNWKGERTG
SNDDNIRAMESEVNVNYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEF
PQEKMCLRLVRGPMRLKPFKFNYPQGFFSHR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagactccagcaagaagaggaaacccaaagtgatccgcacggatgggggcccg
caggagggcaagcggggcaagggcgatgccgaccaggatgtcaggtactacagcgaggag
tgcgaggtggatctccgcgaccccatcaaggactacgagctctacagagagacctgccag
gagctccagaggctgatggcagagatccaggagctgaagagcaggggcatcaaggacaac
gcctcggagatcgacgagcggcgggtgcagagctgtgtccacttcatgaccctgaagaag
ctcaaccgcctggctcacattcggctgaagaaagggagggaccagacccatgaggcaaag
cagaaggtagacgcgtatcacctgcagctccagaacttgctgtatgaggtgatgcacctg
cagaaggagatcaccaaatgcctggagttcaagtcaaagcacgaggagatcgagctggtg
agcctggaggagttttacagggaggcccctgctgagatcagccggcctgccatcaccttg
tctgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggagtgcctgaccagcaaggagaagatcctgaaggagatcgag
gtgaagaaggagtatctgagcagcctccagcctcgactcaacagcatcatgcaggcctcc
ctgcctgtccaggagtacctcttcatgcccttcgaccaggcccacaagcagtacgagacc
gcccggcacctcccgccgcctctctacgtcctcttcgtccaagccagcgcctacggccag
gcctgcgataagaagcttgtggtggccattgaaggcagcgtagaggaagccaaagccctg
tacaagccgcctgaggactcgcaggatgatgaaagcgattccgatgtggaggaggagcag
accacgaagcggcgcagacccaccctgggggtgcagctggacgacaagcgcaaggagatg
ctcaagcgacaccccttgtccgtcacagtggacctgaagtgcaaagatgagaatgtgctt
cacctgaccttctactacctgatgaacctcaacatcatgacggtgaaagccaagtggcca
ccccagggagatgctgagactgggctgctgctgattaatctcttccctcctcctgccagc
gacctgctctccccagactccatcctcaactgcctctatccaggagaccacgggaggaaa
acgcccaacccagccaaccagttccagttcgataaagtgggcatcctgaccttgagcgac
tacgtgacagagctggggcacccctacgtgtgggtgcagaagttgggtggcctgcacttc
cccaaggatcagcctcagcacacggtcactgcagacaactctctgagcgccagccacatg
gagctgacggtgaagctgctgaggtcgcggctgcagtcccgcctggctctccacaagcag
tttgcatcgctggagcacggcgttgtgccggtctccagcgagtgccagcacctcttcccc
accaagatcgtctcgcgcctggtgaagtgggcggccattccctacgcggattacgcggag
ctgccctacactaaagatgtgatagagtccagcttggctgaagacactcacctctactac
atggccctgatagaaagaggcacagccaagctgcaggctgccgtggtcctgaaccccggt
tacgccacgctgccccccatcttcagcctgtgcctcaactggaaaggggagcggacaggc
agcaacgacgacaacattcgggccatggagagcgaggtcaacgtcaactacaaggagctg
tggggacccaaacctggttaccagctcctcaccaaccagctgcagcgcctgtgcatggtg
ctggacgtctacctggagacagagccccatgaccccagcgtggaggggcccaaggagttt
ccgcaggagaagatgtgtctgcgcttggtcagggggcccatgcgcctgaagcccttcaag
ttcaactacccccaggggttcttcagccaccgctga
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