Caprimulgus europaeus (Eurasian nightjar): 306727266
Help
Entry
306727266 CDS
T11931
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ceur04121
]
306727266 (TRIM50)
Ubiquitin system [BR:
ceur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
306727266 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
PRY
zf-C3HC4
TRIM_CC
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
U-box
zf-Nse
Sina_RING
Vps53_N
PTR3_N
ATG17_like
zf-ANAPC11
zf-RING_4
XhlA
XRN1_D2_D3
TRAF3_RING
zf-RING_10
CRLF3_N
DUF16
Motif
Other DBs
NCBI-GeneID:
306727266
NCBI-ProteinID:
XP_079061483
LinkDB
All DBs
Position
20:complement(<11952691..>11958175)
Genome browser
AA seq
495 aa
AA seq
DB search
MARRMSMNELEDQLLCPICLEVFKDPLMLQCGHSYCKSCVVSLSGELDGQFLCPVCRQTV
DCSASPPNVTLARVIEALQSWGEAEPPPESCPTHDNPLSLFCEADQEVICGLCGTIGNHR
QHKITPISTAYCRMKEELSVLLTDVHQYKRNLDEHYSKLINNKSRIANEADVFKWVIRKE
FQELHRYIDEEKATFLESIEGKAAQLISSIESQVKQTSDALQRLKEMQSSLEALSNESQL
DFIRKYGSSQFRSELPSLHPCDGIFCPVSFKPCFHQDDIKMTVWKRLHRRVLPAPETLKL
DPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFDSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTTRPQRIGIYLH
YEKGELTFYNADHPDELSPIYTFQAEFQGQLYPIMDLCWPERGPYSPPIILPAPTMSRHP
RAPYNHPAPEEPPKP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaggatgagcatgaatgagctggaggaccagctactctgtcccatctgcttg
gaggtcttcaaggaccccctgatgttgcagtgtgggcattcgtactgcaagtcgtgcgtg
gtgtcgctctctggagagctggatgggcagttcctgtgccccgtgtgccgccaaacagtg
gactgcagcgcctcaccacccaacgtcacgctggcccgagtcatcgaggcgctgcagagc
tggggcgaggcagagccccccccagagtcttgcccaacacacgacaaccccctcagcctt
ttctgcgaggctgaccaagaggtgatctgcgggctgtgcggcaccatcggcaaccaccgc
cagcacaagatcacccccatctctaccgcgtactgccggatgaaggaggagctgtctgtg
ctgctgaccgatgtccaccagtacaagaggaacctggatgaacactacagcaagctcatc
aacaacaaaagccgcatcgcaaacgaggcggatgtcttcaagtgggtgatccggaaggag
ttccaggagctgcacaggtacatcgacgaggagaaggccaccttcctggagagcatcgag
gggaaggcagcccagctcatcagctccattgagtctcaggtcaagcagacatcagatgcc
ctgcagaggcttaaggagatgcagagctctctggaggcactcagcaacgaaagccagctt
gatttcatccggaaatatggctcctcccagttcaggtcagagctccccagcttgcacccc
tgtgatggaatcttttgccctgtgtccttcaagccctgtttccaccaagatgacatcaag
atgactgtgtggaagcgcctgcaccgccgtgtcctgccagctccagagacactgaagcta
gacccggtgacggcgcatcccctcctggagctcttcaagggtgacacggtggtgcagtgt
gggctctaccagcgccgggacagcaaccccaagcgtttcgactccagcaactgcatcctt
acctgcaagggcttctcctgtggccagcactactgggaggtgattgtgggcaccagaaac
cactggcgtgtgggcatcatcaagggcacagtcagccgcaaaggaaagctcagcaagtct
cccgagaacggcgtgtggctcatcggcctgaaggaagggaaggtctatgaggccttcagc
accccgcgggctaccctgccactgaccacccggccccagcgcatcggcatctacctgcac
tacgagaagggtgagctcaccttctacaacgccgaccatcctgatgagctcagccccatc
tacaccttccaggcagagttccagggccagctctaccccatcatggacctgtgctggccg
gagcgagggccctactccccccccatcatcctgcctgcgcccaccatgagccggcacccc
cgggcgccgtacaaccaccctgccccagaggaacccccgaagccgtag
DBGET
integrated database retrieval system
