Caprimulgus europaeus (Eurasian nightjar): 306727666
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Entry
306727666 CDS
T11931
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
306727666 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceur03019
]
306727666 (NUP188)
Messenger RNA biogenesis [BR:
ceur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
306727666 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
306727666
NCBI-ProteinID:
XP_079062100
LinkDB
All DBs
Position
21:complement(6140399..6167710)
Genome browser
AA seq
1737 aa
AA seq
DB search
MAAGGLRARSSRELWTVLLGRSALREPAQIAGELNNHWQRLLEGLSYYKPPSTTSAEKIK
ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLEKELVPNYRKQFEALYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPEELLAFAKMFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTQEHKLANSDRI
HQEMDNQLLQLGDVSHHAPVLLAWALLRHTVNPEESTNVIRRMGSAAIQLKVFQYLTKLL
RSLSSAGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAG
GYGNLLMSIEQPQGEYSVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPCSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSEGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLA
FHVAETEGSSCASLTEYQMLISAWRMLLIISTSHADIMHLTDSAVHQQLFLDVLNGTKVL
LLVPMSVSCLQLGSMLCTLLLILLKQWKSELGPVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQIKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDAADDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEIS
LRVKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSAS
SRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSSVTPRAQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFT
PDVCQILLDQSLDLAEYNLLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKE
PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggctgcgcgcgaggagcagcagagagctgtggacagttcttctgggc
agatcagctttaagagaaccagcacagattgcaggagaattgaacaaccactggcagaga
ctgttagagggactgtcgtactataaaccgccaagtacaacttccgcagaaaaaataaaa
gctgataaagatgtagctgctccactaaaagagttgggtctgagggtcagcaagtttttg
ggtctggatgaagagcagagtgtgcagttgttacagtgctatcttcaagaggattacaga
ggaacaagggactccttgaagacagttcttcaggatgaaaggcagagtcaggctctgatg
ctgaagcttgctgactattactatgaggagaggatctgcattctgcgctgtgtcctccat
ctactcacttattttcaggatgagaggcacccttacacagcacaatacttccagtgtgtt
gaaaagctggagaaggaactcgttcctaattaccggaaacagtttgaagcactgtacaaa
gcagaagctcctacatgggaaacacatggaaatctcatgacagaacgtcaggtttcccgt
tggtttgtgcaatgcctccgtgaacagtccatgctgctggaagtcatcttcctctactat
gcatactttgaaatggcacctgaggagcttctggcatttgcaaaaatgttcaaagaacag
ggatttggcactagacaaaccaacagacatttggtggatgagagcatggatcacctggtg
gatcgtattggctactttagtgctcttatcctggtggaaggcatggaaattgactccctc
catgagcgtgctttggatgacaggacacaggagcacaagttagccaatagtgaccgcatc
caccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctccggtg
cttttggcctgggctctgctccgccacactgtaaacccagaggagtcaacaaacgttatc
aggaggatgggcagcgctgctatccagctgaaggtgttccagtatctgacaaagctgctg
cggtcgctgagcagtgcggggaagaattgtactgccagcacagcttgtatgtgtatttat
gggctcctttcctttgtcctgacatcgctggaattacatacgctgggaaatcagcaggat
ataattgatgctgcatgtgaagttctggcagcttccagcatccctcagcttttctggaag
acggaacctactgcaggtctgggaattatcctggacagtgtgtgtgggatgttcccccat
cttcttactcctctccttcagcttctccaagcccttgtgtctgataaatctactgcaaaa
aaggtatacagtttcctggataaaatgtctttctatatcgaactgtacaagcataaacct
cctgatgtgatctctcatgaagatggcacactttggagaagacaggctccaaagctcctc
tatcctcttggactaggtcaaacaaatctgcggatacctcagggaacagtgggccaagtg
atgctggatgatcgggcttatttggtacgatgggaatattcttacagcagctggacactg
tttacctgtgagattgagatgctgctccatgtcgtatcaacagcagatgtgattcagcat
tgtcagagggtcaagccaataattgatctggttcataaagtcatcagcacggatgtatcg
atagcagattgccttctgccaatcacgtcacgaatctacatgctcctgcagaggctaaca
actgtgatctctccccctgtggatgttattgcttcttgtgtcaattgtttgacagtactg
gctgctcggatgccagccaaggtttggactgaccttcaccatacgggtttcttacctttt
gttgccaatccagtgtccagtatgaatcacatgattagtgcagagggaatgaatgctggg
ggctatggaaacctcttgatgagcatagagcagcctcaaggcgagtacagtgttaccatc
tccttcctgaacctgatcacaactcttgtccggggacaacttggtagcacccagagccaa
ggacttgtgccttgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatgg
cgttataactctcatggagtgagagaaaaaattggatgccttatcctgcagttgatccat
gctatactgaatttatgccctgaaatggatccttgcagcagcaatgcccccagcctgcag
tccttgtgcatcttcagcctggccaacactgaagcagggcaggcggttattaacatcatg
ggaattggtgtggacactattgatatggtgatggcctcccagtctagcagtgatgagtca
caaggccaaggtcaactcctgatccaaacagttaagctggcgttctcggttaccaacaat
gtgatccggctgaaacccccctccagcgtggtctctccgttagaacaggcccttactcag
catggtgctcatggaaacaatcttattgcggtcttggccaaatacatctaccacaagcat
gaccctgcacttccacgcctggccatccagttgctcaaacgactggctacggttgctccc
atgtctgtttatgcctgccttggtagtgatgctgctgccatccgtgatgccttcctcacc
cgcctgcagagcaagatagaggacatgaggattaaggtcatgatactggagttcctcaca
gttgcagtggagacacagcctgggctcattgagctgttcctgaacttggaagtgaaggat
ggcagtgaggggtcaaaggaattcagcttaggagagtggagttgcctccaggtagtctta
gagctaatagactccaaacaacaggagaggtactggtgccctcccctcttgcatcgcgct
gccattgccttcctgcatgctctgtggcaggaccgtcgagatagcgccatgctagttctg
aggacaaagccaaagttttgggaaaatttaaccaatcccctctttgggacccttcctcca
ccttcagaatcatcagagctcagtgtcttggatacctgtgccttaatcatgaaaatcatc
tgtttggagatctactatgttgtcaagggctccctggatcagtccctgaaagacacgctg
aagaatttctccaccaagaagcgctttgcctattggtcagagtacgtgaagttactggcg
tttcacgtggcagagacagagggcagcagctgtgcctccctgacagaataccaaatgctg
atctcagcctggaggatgctgctgataatctctactagccatgcggatataatgcatctg
actgattctgcagttcatcagcaattgtttctggatgtgctaaatgggaccaaggtgttg
cttctagttcccatgtcagtgtcctgtctgcagctggggtctatgctatgtacccttctt
ctgatcctgctcaaacagtggaagagcgagttgggtcctgtggataaaatcataaactcc
ttgacgcagattctggagggagttctacaggcagatcagcagatgatggagaaaaccaaa
gccaaagtgttctcagctcttatcactgtgctgcaaataaaggagatgaaagtgaatgag
atcccccagtactcccagctggtgttgagcgtgtgtgaaacactccaagacgaggttatt
gcgctctttgatcagactcgacacagcctgaccttgggagatgctgcagatgacaaggac
agcatggaaacagatgatgcctcccgagttaagcacaaggaccaacgagatggggtgtgt
gttctgggtctgcatctagctaaagagctctgtgaagttgatgaggatggagactactgg
ctacagatcactaggaaagtccctgtgcttcctactatctttgctgcattggagatcagc
ctgagagttaaacaaaaccttcacttcactgaggcctcgttacatttactgctgacctta
gcaaggactcaacagggagcagcagcagtggctggagctggtgtcacgcagagtgtctgt
ctgcccctcttgagcgtgtaccagctcagcactaacggagccattcagacatctgcttct
tctcgaaagtctctggatgctccctcttggcctggggtctatcgtctctccatgtcactg
atggaacgccttctgaaaacacttaggtacaacttcctgacagaagcactggactttgtt
ggtgtccatcaagagaggattcttcagtgcctgaatgcagtacggacagtacagagcttg
gcctgtctggaagaggctgatcacactgttggcttcattcttcagctctcaaatttcaca
aaggagtggcatttccacctgccacagcttatgagggacatgcaggtgaatctgtgttac
ctgtgtcaggcctgtacctccctcctgcacagccgcaaaatgctgcagcactacctgcag
acaaaaaatggtgattcccttccatcaagtgtgactccacgagcgcagcgtaatccccaa
gcctcctccaaacatcccagccctgagtcagaggcagcagagcagaaagcgctgcttacg
gtgcagtacagcctcctgaaaatcctcagcaaatctcttgctgccctgcgccacttcacc
cctgatgtctgccagatcctccttgatcagtcactggaccttgctgagtacaacctgctc
tttgttttgagtttcaccacaccagcctttgattcggatgtcgcaccttcctttgggacc
ctccttgccacagtcaacgtggcccttaacatgctgggagagctggataagaagaaggaa
cctttccctcaggctgcagggttgaatatgcaagagggaaccaaaaccctcaagtctctg
cttatgtttacaatggaaaactgtttctacctgctcatctcccaggctgttcggtacctg
agagacccagctgtgcacccccgtgataagcagcggatgaaacaggagctcagctctgag
ctgagcacgctgctctccagcctgtctcgttacttccgccgtggtggtccctcttcacct
gccagtggggttcttccctctccccaaggaaaatctgcctccaagctgggtcccgagggg
caggagcctttgtttcagctcgtgcaggcctttgtccggcacgtgcagagatag
DBGET
integrated database retrieval system
