Caprimulgus europaeus (Eurasian nightjar): 306727702
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Entry
306727702 CDS
T11931
Symbol
WHRN
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ceur03037
]
306727702 (WHRN)
Cilium and associated proteins [BR:
ceur03037
]
Primary cilia and associated proteins
USH complex and associated proteins
306727702 (WHRN)
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
306727702
NCBI-ProteinID:
XP_079062158
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All DBs
Position
21:<9317689..>9357506
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AA seq
927 aa
AA seq
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MSTELDGASLRSSSSSSGSLSSAAGPVPRPLSANVRRLHQALTALLSEAERERFLLCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPSPGRPPP
VPGPGQLRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGDQILGV
NGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSPPMGLP
HHQNSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYITGVDKG
SEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDET
RWIASSQIGETFVSSPGAVGNHAAEVTARPVFYRGLAGSQVTLSSMVNQTRVMLEEQARH
LLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQDLDRFD
NLVLKREIESMKARQPSGPSMGTDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWLIDL
MENTSELEGGGDSHQSSINTLPDISLDDLSSFPDEPPNFKPPPPPSAPQMLDPSAAQHRN
PGKDKPKRPSSESSQSGLFFVAPRNPTPPPTHLEKDTISMTSTATTSTEESAPSAIYATI
SPALHSSRRQMDAQLSLVNQHPIGPFPRVQSPTRLKSPPPDSSPAAGGLQSSPSPSPPPP
PPHPAPPPPDKGSPKSVANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTL
SEDSGVDIGEVETSGKDKSRQLVPGKSRSLKEATRSEGVAEGVSKPPGLLEPTSCLIRVS
KSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLQGKEHREA
ARIIAEAFKLKDKDYIDFLVTEFNVAL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggagctggacggcgcctcgctccgttcctcctcctcttcctcgggctcgctg
agctcggcggcggggccggtaccgcggccgctgtctgctaacgtgcggcggctgcaccag
gcgctgacggcgctgctgagcgaggcggaacgggagcgattcctcctctgcctcaacgct
taccacggccgccgcaacgtctgcgacctggtccgctccctccgcgccctcctcgacggg
ccccgccgccggcagctcctaccgctgctccgcctcgtcttgccgcgctccgaccagctg
ctcttcgatcagtacacggccgaggggccctacctgccatctcccggccgccccccgccc
gtccccggccccggtcagctgcggcaggtaaccctacggcggagcaaagcccacgagggt
ctgggtttcagcatccgcggcggggccgagcacggcgtcggtatctacgtgtcgctggtg
gaaccgggttccctagccgagcgggaggggctgcgagtcggcgatcagattctgggggtc
aacggcaagtccttggacagggtgacccacgctgaagctgtcaaggtcctgaaaggctgc
aagaagctgaacctgtctgtacactcggtgggacgtatcccagggggctatgtcaccaac
cacatctacacctgggtggacccccagggccggagtgtgtccccaccgatgggcctgcca
caccatcagaacagctccctgcggaaggacagcgagaagaggagccacctccagctcctg
caagagggagatgagaaaaaggtgaatctagtcctgaatgaagggaaatccctgggcctc
atgatccgaggaggggcagagtattccctgggcatctacatcaccggggtagataaaggc
tccgaagcagagagcactggcttaaaggtaggagaccagatcctggaagtgaacggcagg
agcttcctcagcatcccccacgatgaggcagtgaagctgctcaagtcttcccgtcacctc
atcatgacggtgaaggacattgggaggctgccccacgcccgcaccacggtggatgagacc
aggtggatagcgagctcccagatcggagagaccttcgtcagctcaccaggggcagtgggc
aaccatgctgcagaggtgacagccaggcctgtgttttatcggggtctggctggttcccag
gtgacactgagcagcatggtgaaccagacccgggtcatgctggaggaacaggcacggcac
ctgctcaacgagcaggagcgggcaaccatgggctactaccttgatgagtataaagaaggc
aacatctccgtggatgctctggtcatggcactcttcgagctgctcaacacacatgctaag
ttctcgctgctgtcagaggtgaggggtgtgatctccccacaagacctcgaccgcttcgac
aacctggtgttgaagagagagatcgagtccatgaaggcacgtcagccctcagggcccagc
atgggcactgactcctactctatgatgtcctacagtgacactgtctcctcctccagcagc
cacttcactgccacaaccgtcagctcagcccgggagcggctcttgtggctaatagacctg
atggagaacacatcagaattggaaggaggtggagatagccaccaaagtagcatcaacacg
ctgccagacatctccctggatgatctctcctccttcccagatgaaccacccaacttcaag
cctccacctcctccttcagcccctcagatgctggacccttctgctgcccagcacaggaac
ccagggaaagacaagcccaagcgcccttcctctgaatcttctcagtcaggcctcttcttt
gtggccccccgaaaccctacgccccctcctacccaccttgagaaggacaccatcagcatg
acctccacggctaccacatccaccgaggagtctgcccccagtgctatctatgccaccatt
tccccagccctgcacagctccaggaggcaaatggatgctcaactctccttggtcaaccag
caccccatcggtcccttccccagggtccagtccccaacgaggttgaagagcccaccccca
gacagcagccctgcagctggtgggcttcagagctccccttccccatctcctcctccaccc
ccaccccacccagcaccccctccaccagacaagggcagccccaagagcgtggccaaccag
catttcatcatggtggaggtgcaccaacccaacagcgagcccgacgtcaatgaagtgaga
cctttgcctcaggccagagcctccacgctctcccagctgtcggacagcgggcagaccctc
agcgaggacagcggggtggacatcggggaggtggagacgagcggcaaggacaagagccgg
cagctggtccctgggaaaagccgaagcctcaaagaggccacgaggagtgagggggtggca
gaaggggtctccaagccgccagggctcctggagcccacgtcgtgtctgatccgagtgtcc
aagagcgccccgaccttggggatcgccatcgaggggggagcaaacacgcggcagcctctg
ccccgcatcgtcaccatccagcgtggtggttcagcacacaactgtgggaagctgaaggtg
ggtcacgtcattttggaggtgaatggcacagggttacaggggaaagaacaccgggaagcc
gcccgcatcatcgctgaagcctttaagctgaaggacaaggactacatcgatttcttggtc
acagaattcaacgtcgccctttag
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