Caprimulgus europaeus (Eurasian nightjar): 306727911
Help
Entry
306727911 CDS
T11931
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur04510
Focal adhesion
ceur04512
ECM-receptor interaction
ceur04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
306727911 (TNC)
04518 Integrin signaling
306727911 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
306727911 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ceur00536
]
306727911 (TNC)
Glycosaminoglycan binding proteins [BR:
ceur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
306727911 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_PBP1
Fn3_Dep-1_2nd
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
DUF7949
Pur_ac_phosph_N
EGF
Interfer-bind
NDNF
EGF_PEAR1L
hEGF
DUF4998
Fn3_ROS1
EGF_TGFA-like
SPE9_EGF_3rd
Big_5
Motif
Other DBs
NCBI-GeneID:
306727911
NCBI-ProteinID:
XP_079062485
LinkDB
All DBs
Position
21:<9077307..9124316
Genome browser
AA seq
1807 aa
AA seq
DB search
MGLLTQVLACTILALLYQHVNGGLIKRIIRQKREAGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTTSGDADLKAEVEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCICEP
GWKGPNCSEPNCPHNCFNRGLCVQGKCICSEGFTGEDCSQATCPSDCNDQGKCVDGVCVC
FEGYTGTDCSEELCSQGCSVHGKCMSGQCVCHEGFTGEDCSEPLCPNNCHNRGRCVDNEC
VCNEGYTGEDCSELICPNDCFDRGRCVNGTCFCEEGFTGEDCGELTCPNNCNGNGRCENG
LCVCYEGFVGDDCSEKRCPKDCHNRGRCMGGRCICHEGYLGEDCGELRCPSDCHNRGRCV
NGQCVCHEGFIGEDCGELRCPSDCHNRGRCVNGQCVCHEGFTGDDCGELRCPNDCNNRGL
CVNGQCVCDEGYTGEDCGELRCPEDCHNRGRCVEGRCECDNGFTGEDCGELSCPNDCHRR
GRCINGRCVCHEGFVGEDCREQSCPNDCNNAGRCIDGRCVCEDGYMGDDCSNVSPPTELT
VTNVTDKTVNLEWKHENLVNEYLITYVPTSSGGLDMQFTVPGNQTAATIHELEPGVEYFI
RVFAVLKNKKSIPVSARIATYLPAPEGLKFKSVRETSVQVEWDPLNFSFDGWELVFRNMK
KDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSKVITTKLDAPSQIE
AKDVTDTTALITWSKPLAEIEGIELTYGPKDIPGDRTTIDLSEDENQYSIGNLRPHTEYE
VTLISRRGDMESDPMKEVFVTDLDAPRNLKRVAQTDNSITLEWKNSHANVDNYRIKFAPI
SGGDHAEITVPKGNQATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPKD
LEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGRKNEVEIPVDSTSFILRGLEAGTEYT
ISLVAEKGRHKSKPTTVKGSTEEEPELGKLSVSETGWDGFQLTWTAADGAYENFVIQVQE
SDNPEETRNITVPGGLRFLNVTGLKANTPYNITLYGVIQGYRTKPLSVETVTGVHPEVGE
LTVSDITPESFNLSWTTTNGDFDIFTIEIIDSNRLLEPMEFNISGNARTAHISGLSPSTD
FIVYLYGISHGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKI
RDTKRKSDPLELIVPGHERTQDITGLKEGTEYEIELYGVSSGRRSQPVNAVATTVVGSPK
GISFSDITENSATVSWTPPRTRVESYRISYVPVTGGTPNVVTVDGSKTRTKLVKLIPGVD
YNVSIISVKGFEESEPISGTLKTALDSPSGLVVVNITDSEALATWQPAIAAVDNYVVSYA
SEDEPEVTQMVSGNTVEYDLKNLRPATEYTLSVHALKDMQKSETLSTQFTTGLDAPRDLS
ATEVQSETAVITWRPPRAPVTGYLLIYESIDGRVKEVILNPETTSYSLAELSPSTQYTVK
LQALNRSLKSKTIQTIFTTTGLLYPYPKDCSQALLNGETTSGLYTIYLNGDKAQPLQVFC
DMGEDGGGWIVFLRRQNGKEDFYKNWKTYVAGFGDPKDEFWIGLENLHKITSQGQYELRV
DLRDKGETAYAVYDRFSVGDVKSRYRLRVDGYSGTAGDSMMYHNGRSFSTFDKDNDSAIT
NCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNL
EGRRKRA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggactcctcacccaggttttggcctgtacaatcttagctttgctgtaccagcatgtc
aatggtggactcatcaagcgaattatccggcagaagcgggaagctgggctaaacgtgacc
ttgccagaggataatcaacctgtggtttttaaccatgtctacaacattaagttgcctgtt
ggctccctttgctctgtggacctggatacaacgagcggtgatgcagacctgaaggcagaa
gttgagcctgtcaagaattacgaggagcacacggtgaacgaagggaaccagattgtcttc
acgcatcgtattaacattccccgccgggcttgtggctgtgcagctgccccagacattaag
gatctgctgagcagactagaggagctggaggggctggtatcctccctacgggagcagtgt
gccagcggggctggatgctgtcctaattcccaggcagtagaaggtcgcttggacacaaca
ccctactgcagtggacatggcaattacagcatcgagatctgcggctgcatttgtgagcct
ggctggaaaggtcccaactgctccgaacccaactgcccacacaactgcttcaaccgtggt
ctctgtgtccagggcaaatgtatctgcagtgaaggcttcactggtgaggactgcagtcag
gccacctgcccatctgactgtaatgaccaaggcaagtgcgtggatggggtttgcgtgtgc
tttgagggctacacaggcacagactgcagtgaagagctctgctcccaggggtgcagcgtg
catgggaagtgcatgagcgggcaatgcgtgtgccacgagggcttcaccggcgaggactgc
agcgagcccctctgccccaacaactgccacaaccgtggacgctgtgtggacaacgaatgc
gtttgcaatgagggctacactggcgaggactgcagcgagcttatctgccccaatgactgc
tttgaccgtgggcgctgcgtcaacgggacctgcttctgcgaggagggcttcaccggggag
gactgcggggagctgacctgccctaacaactgcaatggcaacgggcgctgtgagaatggg
ctgtgtgtctgctacgagggctttgtgggggatgactgcagtgagaagaggtgcccaaag
gattgccacaaccgcgggcgctgcatgggtgggcgttgcatctgtcacgagggttacctg
ggtgaggactgtggggagctgcggtgccccagtgactgtcacaaccgcgggcgctgtgtc
aacgggcagtgtgtgtgccacgaaggcttcattggggaggactgcggggagttacggtgc
cccagtgactgtcacaaccgcgggcgctgtgtcaacgggcagtgtgtgtgccacgaggga
ttcactggggacgactgtggggagctgcggtgcccaaatgattgcaacaaccgtggactc
tgtgtcaacgggcagtgtgtgtgtgatgaggggtacacaggggaggactgtggggagctg
aggtgccctgaagactgccacaaccgtggccgttgtgtggaaggacgctgtgagtgtgac
aatggcttcacaggggaggactgcggtgagctgtcctgccccaacgactgccacaggcgt
gggcgctgcatcaatgggcgctgcgtgtgccatgagggcttcgtgggggaggactgccgt
gaacagtcctgccccaatgactgcaacaatgcgggccgctgcatcgacggacggtgtgtc
tgtgaggatggttacatgggggatgactgctccaatgtgtctcctccaacagaactgact
gtgacaaacgtaacagataaaactgtaaatctggagtggaagcatgagaatctcgtcaat
gagtacctcatcacctatgtccctaccagcagtggtggcttagatatgcagttcactgtg
ccaggaaaccagacagctgccactattcatgagttggaaccaggtgtagaatattttatc
cgtgtctttgcagtccttaaaaacaagaagagtattccagtcagcgccaggatagcaaca
tatctgcctgctccagaaggtctgaaattcaaatctgttagagaaacatctgtccaagta
gagtgggatcctctgaacttttcatttgatggttgggagctggtattccgtaatatgaaa
aaggatgataatggagatataaccagcagcttgaaaaggccagagacatcttacatgcag
ccaggtttggcaccagggcaacagtataatgtgtcccttcatatagtgaaaaacaatacc
agaggaccaggactatccaaagtgataaccacaaagcttgatgcccctagccagatcgag
gcaaaagatgtcacagacaccacagctcttatcacatggtccaaacccttggctgaaatt
gaaggtatagagctcacttatggccccaaggatattccaggggacaggacaaccattgac
ctctctgaagatgaaaaccaatattctattggaaacctgaggccacacacagagtatgaa
gtgacgctcatctctcgtcgaggggacatggaaagcgaccccatgaaagaagtctttgtc
acagacttggatgctccaagaaacctgaagcgggtggcccagacagacaatagcattact
ttggagtggaaaaacagccatgcaaatgttgataactatcgaatcaagtttgctcccatc
tctggtggagaccatgctgagatcacagtgccaaagggcaaccaagcaacaacgagagct
accctcacaggcttgaggcctggaactgaatatggcattggagtgacagcagtgagacaa
gacagggaaagtgctcccgctaccattaacgctggcactgatcttgataaccccaaggac
ttggaagtcagtgaccccactgaaaccaccttatcccttcgctggagaagaccagtggcc
aagtttgatcgttaccgcctcacttatgtcagcccttctggaaggaagaacgaagtggag
atccctgtggacagcacctcttttatcctgcgagggctggaggcagggacagaatacacc
atcagtctggtggcagagaaaggaagacacaaaagcaaacccaccactgtcaagggttcc
actgaggaggaacctgagcttggaaaattatcagtatcagagactggctgggatggtttc
cagctcacctggacagcagctgatggggcctatgagaactttgtcattcaggtgcaggag
tctgacaatcctgaagaaacccggaatatcacagtcccaggtggactgcgctttctgaac
gttacaggactcaaggctaacacaccttataacatcaccctttacggtgtgattcaaggc
tacaggaccaaacccctttctgttgaaactgtgacaggagtgcacccagaagttggtgag
ctaaccgtttccgacattactcctgaaagcttcaacctttcttggacaaccaccaatggg
gacttcgacatcttcactattgaaattattgattctaacaggttgctggagcccatggag
ttcaacatctcaggcaatgcaagaactgctcatatctcagggctttcccccagcactgat
tttattgtctatctctatgggatctctcatggtttccgcacacaggcaataagtgctgca
gctacaacagaagcagaacccgaggtcgacaaccttctggtttcagatgctactccagat
ggattccgtctctcctggactgcagatgatggagttttcgacagttttgtcctaaaaatc
agggataccaaaaggaaatctgacccactggaattaatagtaccaggccatgagcgcacc
caggatataacagggctgaaagagggtactgaatatgaaattgagctctatggagttagc
agtggacggcgttcccaacccgtaaatgcagtagcaaccacagttgttggatctcccaag
ggaatttctttctctgacatcacggaaaactctgctacagtcagctggacaccccctcgc
acccgcgtggagagctaccggatctcctatgtccctgtcacaggaggtactccaaatgtt
gttacagtcgatggaagcaagacaaggaccaagctggttaagttaatcccaggagtagac
tacaacgttagtatcatctctgtgaaaggctttgaagaaagtgaacccatctctggcact
ctgaaaacagctctggacagcccatcaggtctagtagtggtgaacatcacagactctgag
gctctggcaacctggcaaccagcaattgctgctgtggataattatgttgtctcctatgct
tctgaggatgaaccagaagttactcagatggtatcaggaaacactgtggagtatgacctg
aagaaccttcgacctgcaactgagtatacactgagtgtccatgcactgaaggacatgcag
aagagtgagaccctctccacccagtttactacaggactggatgctccaagagatttaagt
gccactgaggttcagtcagaaacagctgtgataacatggagacctccacgtgctcctgtc
actggttatctcctgatctacgagtccattgatggcagagtcaaggaagtcatcctaaac
cctgagacaacttcctacagcctggcagagctgagcccatcgacccagtacacggtgaaa
ctccaggcactgaacagatccctgaagagcaaaacgatccagaccattttcaccacaact
ggtcttctctatccttaccctaaagactgctcccaggctctcctgaatggagaaaccacc
tctgggctctacacaatttacctgaatggggacaaggctcagcctctgcaagtcttctgc
gacatgggcgaggatgggggcggatggattgtgttcctgaggcgtcaaaatggcaaagaa
gatttctataagaactggaagacgtatgtagctggttttggagatcctaaggatgaattc
tggataggtctggagaacctccacaaaatcacatctcagggccagtatgagctgcgtgtg
gatctgagggacaaaggtgagacagcttatgctgtctacgacaggttcagcgttggagac
gtgaagagcagataccggctgagagtggatgggtacagtggcacagcaggtgactccatg
atgtaccataatggaaggtccttctccacctttgacaaggacaacgattctgccatcacc
aactgtgctttgtcatacaagggtgcattctggtacaagaactgtcaccgagtcaatctg
atgggcagatatggtgacaacagccacagtcagggtgttaactggttccactggaagggc
cacgaatattccatccagtttgcagagatgaagctgagaccatccagcttcagaaatctg
gaaggaagacgaaagcgagcgtaa
DBGET
integrated database retrieval system
