Caprimulgus europaeus (Eurasian nightjar): 306731791
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Entry
306731791 CDS
T11931
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform 1
KO
K12600
superkiller protein 3
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
306731791 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceur03019
]
306731791 (SKIC3)
Messenger RNA biogenesis [BR:
ceur03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
306731791 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_16
TPR_14
TPR_12
TPR_11
TPR_8
TPR_17
TPR_CcmH_CycH
CFAP70_TPR_C
ANAPC3
TPR_9
CFAP70_mid_TPR
CABIN1_N
TTC22_N
ARM_TT21_C
TPR_15
Fis1_TPR_C
MSC6_N
BTAD
DUF8323
TolB_N
Retrotran_gag_2
HAT_PRP39_N
TPR_30
HAT_Syf1_M
ARM_TT21
TPR_5
Motif
Other DBs
NCBI-GeneID:
306731791
NCBI-ProteinID:
XP_079068476
LinkDB
All DBs
Position
Z:464050..515471
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYRKAIDLEPNQLLAWQGLANLYEKSNQTDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIQRKEEEGAEKAELHQLWKKMIQLLKDSTQDQDNKTTQ
SLLTAFEHAVNSVDTVPSEDHEKLYKDFIQCLSRFPHEAGRLEKACHDMMALYPTVSYPL
EVLCLHFVQSGTLSEEAFHCFSRLLEMDASSGPGIIGFGIKCLQEKKYEEAIKSLTEGLQ
KTSLCPAAWYYLAEAQMKIHKHKDAVSSCNRALEALGTPEGPSLRWKNLILQLKAEALIK
IADADAAEEAIKALEQIVDASSDPVILAIRGQAYLNKGLVDEASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAVEKKGETAEYHQYLGLTYWFMSDETRKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDETNEESGTATVDLSVELG
DMDTALSILNQVTAKASPGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRRASELNPGLIYSVYRAAAVEQILGKYENAIATYQQILQST
EEYVPALKGLGECYLMLARSALDNYFDRKAVDHIEQALDFFTRATKQRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVPGCLLGKNAGKEMLKKSELLELGGRCYGRALKLMPLPSIWCDL
GINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLVTGNIEQAHEAFKVAQSLEPSYLLCWIGQA
FIAEMVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDESNRNTEQYLYNIVQMNAI
PAAHVVLSKYTERNPDDASAFSMLGYLNECLHLKRQAADAYERAASLLKNSEDTEKYYTA
MQNYGRSLCALGECDKAIEVYTSTPLAEFDGIVGIALAYFKKGLFQESIKAYEKALSVAG
SEEDKVHILTALAIIEYKQNKVDAAKTLLFKCSLKEPTIESLKALCTLGLVKQDATLATA
ALKELLKHEKAKDDIYDRCLIASAVYALQGRNLVAQREVSRAIHSNPDNPALWSLLSRLV
PLYASQKAKGGAVAGGVAYALDVNHGKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
HLCPDNPAAWAVLMAACHAENTVVCLNNTQPKRTGLEMTLVSTVSAKTGESSLPHSYIQT
LEDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
TILEELRKVVMTSSTSAAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALDISMANVSNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNNKMGARETRR
MLERVVHQPGNPETIASVARWYLLQHLHAKDDSELIDVLIENAKAHGDVRTLELHEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaggaggtgaaggcagcattaaagagtgctagagaagcaatacgaaataaa
gagtataaggaagccttaaaacactgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcctggcagctgctgaattagaacaacctgatcaggctaaa
ggagcgtataggaaggcgattgaccttgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttagcagatgtttac
cagaagctcttggaactctatgaaagtggtgacaagcagaaatggtgtgacgtgtgtaac
aagcttgtggaactgtatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactaatacagaggaaagaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccagctgctgaaggacagcacacaggaccaggataataagaccacgcag
tcgcttttgactgcatttgagcacgcggtgaactctgtcgacactgttcccagtgaagac
cacgaaaagctttacaaggactttattcagtgcttgtcaagatttcctcatgaagcgggt
aggttggaaaaggcctgtcatgatatgatggctttgtatcctactgtcagttatccttta
gaagtactttgcctgcactttgttcagtcaggtactttgtcagaagaagcctttcactgt
ttttcgaggcttttggagatggatgcaagtagtggtccaggcatcattggttttggtata
aagtgcctccaagaaaagaaatatgaggaggctattaagagccttactgaaggtttgcag
aagaccagcctgtgtccagcagcgtggtattacttggcagaggcacagatgaaaattcac
aagcacaaggatgctgtctcatcctgcaaccgagctcttgaggctcttggaactccagag
ggtcctagtcttcggtggaaaaaccttatccttcagttgaaagcagaggctttgattaaa
attgctgatgctgatgctgcagaagaagccattaaagcacttgagcagattgtggatgca
agcagtgatccagtgattttagctatcagaggtcaggcctatctaaacaaaggtttagtg
gatgaagcttcaaagatttcacaagagcttctgttgtcccaccctgacctggctgagtcc
catgctctagagggtttcatccattattcccaaaagaactatgaacaggcagaaagaagt
tttctgaatgctgttgaaaaaaagggtgaaactgcagagtatcatcagtacctggggctc
acatactggttcatgagtgatgagacaagaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tatagagacattgctggagacaaaagcagagctcgtggttgctataaaaaggcttttgaa
ctggatgaaaccaatgaggaatctggaacagcaactgtagacttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatcaggtaactgcaaaagcgagtcctggtaca
gcaaaatgggcctggcttcatcgtgggctttactacctgagaacgggtcagccgtcacaa
gcagtggctgatttgcaggcagctctgagggctgatccaaaggattccaactgctgggag
tctctaggagaggcttacttgagcagaggcagctattccacagctctcaaatccttcagg
agggcaagtgagctgaacccagggctcatctacagcgtttacagagctgcagcagttgag
cagattctgggcaaatacgaaaatgccatagctacctatcaacaaatcttacagagtaca
gaagagtacgtgcctgcactgaaaggtcttggtgagtgctatctcatgctggcaagatca
gcccttgataactattttgataggaaggctgtggatcacatagagcaagcacttgatttt
tttacaagggcaacaaagcagcgtcctgatgtatcttgcctctggaaactgcttggagac
acctgtaccagcgtgcatgttatttcaccaaccaaagtgaatgtgcaagttccaggctgc
cttctgggtaaaaatgcaggcaaagagatgctgaagaaaagtgagctgctcgaactagga
ggaaggtgttatggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctggagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttactggaatgcacttggtgtagttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaacgttgtt
gcctggaccaatttgggggttttgtatctggtaactggaaacatcgagcaagctcatgaa
gccttcaaggtagcccagagtctggagccttcttacttactgtgttggattggacaggct
tttattgcagagatggtgggcagctatgatactatggatctcttcagacacacaactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacactgcag
gatgagagcaacagaaacactgaacagtatctgtacaacattgttcaaatgaatgcgatt
ccagcagcccacgtggtcttgagcaaatacacagaaagaaatccggacgatgcatctgct
ttctccatgcttggttatttgaatgagtgtctgcacctaaagaggcaggcagcagacgcc
tatgagagggcagcttcattgctaaagaactctgaggatactgaaaaatactacacagca
atgcaaaactacggcaggtcactgtgtgcccttggtgagtgtgataaggccattgaggtt
tatacatcaacgcccctggctgagtttgatggcattgtggggatagcattagcctacttc
aagaaaggactctttcaggaaagtatcaaagcctatgaaaaagctttgtctgttgctggg
tctgaagaagataaagtgcatatcctgactgcattggcaataatagagtataaacagaac
aaagtggatgctgcaaagacactgctgtttaaatgctcgttaaaggaacctaccatagaa
agtctgaaggctttgtgcacactcggactggtgaagcaggatgcgacacttgcaacagca
gccctaaaagaattgctgaagcatgagaaagccaaagatgacatttatgacaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatctggtggcccagagagaagtctcc
agagcaatacatagtaaccctgataatcctgccctctggtctctcttgtctcgacttgtt
ccactgtatgcatcgcaaaaggcaaaaggcggagctgtggcaggaggcgtcgcgtatgca
cttgatgtaaaccatggaaaggaagttctgctgaatattgcagttaatcagttggcagca
ggatgtcacatgctagaagatgagaaaaacaaccctctgaaaaatattcagaaggcaatc
cacctctgtccagataatcctgctgcctgggcagtgctgatggcagcctgtcatgctgaa
aacactgttgtctgtctcaacaacactcagccaaagcgaacgggtctggagatgacactt
gtatctacagtttcagccaaaactggagaaagtagccttccacatagttatatccagact
cttgaggactggtgtctatgtcaagctattacgagtctagaggagactggtaaactctca
gaagctgaagctctttgtaccaagggtttaaaaagctgtcctgagcacccagctctgttt
ctgcttttgagacaagttcagtgtaagcagctgctgcagtctcacaaagaacttccagac
accatcctggaggagcttcgcaaggtggtcatgaccagctccacctcagctgcagcctgg
cagtggctggcaaaagtatatcagtctcagagaatgatggtgggagcagagatgtgctac
agaaagagcctgcagttggcgtcccagcagggcagctggaacgggaagctctccagcctg
ctcaggctggctatgctggcactggacatctccatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttcttcttgccccctggca
gctctcctacaagcactgctacagtataataacaaaatgggagcaagggagactcgtcgg
atgctggaaagggtggtgcatcagccggggaatccagaaaccatagcgtcagtggcacgc
tggtacctcctgcagcatctgcatgccaaagatgatagtgaattaatagatgtgcttata
gaaaatgccaaagctcatggagatgttagaactctggaactgcatgagaaattgtcagca
agtgcctag
DBGET
integrated database retrieval system
