Caprimulgus europaeus (Eurasian nightjar): 306732646
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Entry
306732646 CDS
T11931
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform 1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ceur Caprimulgus europaeus (Eurasian nightjar)
Pathway
ceur03008
Ribosome biogenesis in eukaryotes
ceur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceur00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
306732646 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
306732646 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceur03021
]
306732646 (XRN2)
03019 Messenger RNA biogenesis [BR:
ceur03019
]
306732646 (XRN2)
03009 Ribosome biogenesis [BR:
ceur03009
]
306732646 (XRN2)
03016 Transfer RNA biogenesis [BR:
ceur03016
]
306732646 (XRN2)
Transcription machinery [BR:
ceur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
306732646 (XRN2)
Messenger RNA biogenesis [BR:
ceur03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
306732646 (XRN2)
Ribosome biogenesis [BR:
ceur03009
]
Eukaryotic type
Pre-60S particles
RNases
306732646 (XRN2)
Transfer RNA biogenesis [BR:
ceur03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
306732646 (XRN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
DUF8363
Motif
Other DBs
NCBI-GeneID:
306732646
NCBI-ProteinID:
XP_079069845
LinkDB
All DBs
Position
2:complement(12691055..12743286)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQE
FIFIRLCVLREYLERELTMASLPFSFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSPSPNTSL
TSDGSPSPAGGIKRKADDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMG
VFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEPVDIPPELCHGIQG
KLTLNENAVLPDQVVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPV
LKPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSVFRTLGHTMPRERGMPGMYANAVPLG
TYGSPYARPLLGGQQQIPKLLSNLRPQEPWRGPAPLFQQAPQRTAGAAPLLAWNRMLQSQ
NQYQPSQYQGLGGPMGYPQRPEDRMDRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccggcctttttccgctggctcagccgcaagtacccctctatcatcgtcaac
tgcgtggaggagaaggctaaagagtgcaatggcgtcaaggctccaattgacacgagcaaa
cctaaccctaatgaggtggaatttgataacctatatttggatatgaatggtataattcac
ccttgtacacatccagaagacaagccagcacccaaaaatgaagatgagatgatggtggca
atttttgagtatattgacaggatcttcaacattgtaagaccaagacgacttctttacatg
gctatagatggagtagctccacgtgcaaaaatgaatcaacagcgatcaagaagattcaga
gcatcaaaggagggcatggaagctgctgaagagaagcaaaagataagacaagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagagatttgacagcaactgtatt
actccaggaactgagtttatggacaatctggctaaatgtctccgctattacattgctgac
cgtttgaacagtgacccagggtggaaaaatttgacagttattttgtctgatgctagtgct
cctggtgaaggcgaacataaaatcatggattacattagaagacaaagagctcaaccaaac
catgacccaaacactcatcactgtctgtgtggggctgatgctgatctgattatgcttggg
ttagctacacatgaaccaaacttcactataattagggaagagtttaaaccaaataaaccc
aagccatgtgctctttgtaaccagatgggtcatgaagttaaggattgccaaggtttgccc
agagaaaaacaaggcaagcatgaccagtttgcagacagtcttcctatcgcggaacaagaa
ttcatcttcatccgattatgtgtgttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcagctttgattttgaaagaagtgtcgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccgtctttggagatcagggagggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactggggggtacctcacagaa
agtggtttcgtcaacctacagcgggtccagatgatcatgttagctgttggagaagttgaa
gatagtattttcaaaaagagaaaagatgacgatgataactttaaaagacggcaaaaagaa
aagagaaaaagaatgaagagggatcagccttcttttattcctggtggacagttttcccct
caagctctgggaaatcgatctagtcctcaggcaatcagtaaccctagacaagctgctttt
gagatgagaatgcatgacagacagaattctacaacttcaccatctccaaataccagcctc
acttctgatggcagcccatcgccggcaggaggaattaagcggaaagctgacgatagtgac
agtgaacctgagccagaggataatatcaggttatgggaaactggttggaaacagcgctac
tataaaaacaaatttgatgttgatgcatctgatgagaaattccgtcgtaaagttgtacag
tcctatgtggaagggctttgctgggttctcagatattattatcagggctgtgcgtcctgg
aactggtattacccttttcactatgctccgtttgcttctgactttgagggtattgcagac
atgccttcagattttgagaaaggctcaaaaccgtttaagcctctcgaacaacttatggga
gtatttccagctgcaagtggaaattttctgccaccaacgtggaggaagctcatgacagat
ccggaatcaagtataattgacttctaccctgaagattttgctattgatttaaatggaaag
aaatacgcttggcaaggtgttgcgttattgccatttgttgatgagcgacgcctcagagct
gccctggaagaagtctatcctgacctcactcctgaagaaagcagaagaaatagccttggt
ggtgatgttctctttgttggaaaacaccatccactttgtgactttatcgtagaacagtac
aagaccaaaaatacagagccagtggatatacccccagagttgtgccatggaatccaggga
aagcttacactgaatgaaaatgctgttcttccagatcaggtagtggagtctcctgttcca
atgctgcgtgatcttgcacaaaattctgcagtcagtatctctttcaaagatccacaattt
gatgaagactttgttttcaaggctatagtgttacctggtgcaaagaaacctgctccagtc
ctgaagccaggagactgggaaaaaaccaacaacgatggcagaccttggagaccacagctt
ggttttaacagagacagaaaaccagtgcatttggatcaatcagtgtttagaactttaggc
cacacgatgccaagggaaagagggatgccaggaatgtatgccaatgcggtacctcttgga
acttatggaagcccgtacgccaggccgcttctgggtgggcagcagcagattcctaaattg
ttatcaaatcttagaccccaggagccttggcgaggtcctgcgcccctctttcaacaggca
ccgcagagaactgctggagctgctcctctccttgcctggaaccgtatgctgcaatcccaa
aatcagtaccagccaagtcagtaccagggcctgggcggaccaatgggttacccacagaga
cctgaagatcggatggacaggggaagacaggcatatggccccgggaggccctacccactg
ccacctccctcaggaagatacagctggaattag
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