Coprococcus eutactus: LK421_01100
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Entry
LK421_01100 CDS
T07943
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cev
Coprococcus eutactus
Pathway
cev03030
DNA replication
cev03430
Mismatch repair
cev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK421_01100
03430 Mismatch repair
LK421_01100
03440 Homologous recombination
LK421_01100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cev03032
]
LK421_01100
03400 DNA repair and recombination proteins [BR:
cev03400
]
LK421_01100
Enzymes [BR:
cev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK421_01100
DNA replication proteins [BR:
cev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LK421_01100
DNA repair and recombination proteins [BR:
cev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LK421_01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
HHH_6
Rv2179c-like
RNase_H_2
tRNA_anti-codon
DEDDh_C
DNA_pol3_a_NII
HHH_5
HHH_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UEA81028
LinkDB
All DBs
Position
complement(249809..254590)
Genome browser
AA seq
1593 aa
AA seq
DB search
MQDAMAYEQQMYEEQMQSLMYEDMQMEPQPVNEAPVQNVPDKVQASVQDEPEKTEGKHAE
TESDEKENPERQLFFDVFGGLEMPKELDGLFREEVYVTRVVIIENREILRVDISSRHIIS
RPNIEKAEEALRKHIFGKRRYTVQIREHYDLSTQYNLEAIVRAYEKSILYDIKSFSNVGY
RLISRSVGDWYCDADVITIAIEDSKIAHIHADKIKHYMEEMFHDRFDMNVNVAFEFNEAD
KEKLRRASALVEQQKIDAILSNLRDHGDIIVDGQAVGKEQLAVSKSSEKAAGEKKTETKA
ALATAGDNAQKPAGKEAFGRRKRYSDDPDVFIGRDVEGQLLEISSINDGIGEVVIHGQIM
NTEERELRNGKIILTGYITDFTDTIGFKMFCSPEDMEVYREEIQKGKFYRMKGLAEFDSY
AKEVMICRVLGMKHIQDFRVPRMDTYPEKRVELHMHTKMSEMDSVVDIETIVKRASDWGH
PAIAITDHGVVQAFPIANHTKGLRKDFKIIYGVEGYFVDDLKDLVKNSRNQSLDSEYVVF
DIETTGLSKKHNKIIEIGAVKVKDGEVVDTFSEFINPGVPIPYQIEQLTSINDDMVKDAP
MYDVIVPRFVEFCGDDIVVAHNASFDTGFVKKNAEELGLRFDNTVLDTMTLSHILLPELG
KFTLDRVCKELKVVNAHHHRAIDDAEATSKVFFKLLDMLKERDVKTMDDLNVLGSTSPDA
IKKDKTYHGIILAKNEIGRVNLYRLISESHLTYFARRPRMPMSLINKYREGLILGSACEA
GELFRAIVDDAPDEEIVRLVNWFDYLEIQPIGNNEFMTRDTRNPKTMDDLIEYNKRIVEL
GEMFNKPVVATCDVHFLNPEDYIYRAIIMKSKGFDDADMQPPLYFRTTEEMLAEFQYLGS
DKAREVVITNTNMIADMVERIEPVRPDKAPPIIENSDQTLTDICYTKAHQIYGPELPPQV
QERLDRELHSIISNGFAVMYIIAQKLVWDSNDHGYLVGSRGSVGSSFVATMAGITEVNPL
SAHYICPKCHFVDFDSELVKSYSGMSGCDMPDRDCPNCGTPLIKEGHDIPFETFLGFNGD
KEPDIDLNFSGEYQSKAHAYTEVLFGKGKAFKAGTVGGVAEKTAFGYVYNYFKDHSKEEL
MAEAKASGMDEKAAKKYAEENATVTKRRCEMERLALGCTGVRRTTGQHPGGMIVLPRHEE
IYSFTPIQHPANDVTSDIITSHFEYHSIDHNLLKLDILGHDDPTMIRRLEDLTGLDATKI
RLDDKDVMELFHSTKSLGITPEDINGIPLGSLGVPEFGTDFAMQMLIDAKPTCFSDLVRI
AGLAHGTDVWLGNAQELIKSGKCTISTAICCRDDIMVYLIHMGLDAGLAFNIMEKVRKGI
VAKGKCDKWEDWKAEMAAHGVPDWYVWSCQKIKYMFPKAHAAAYVMMAWRIAWFKVNYPL
EYYTAFFSIRADDFSYEMMCFGKERVLFHINEISKVDKNKRSAKDEGKLKDLKIVLEMYA
RGYDFVPIDIYKAKADRFQIIDGKIMPSFASIEGMGEKAAQQLYEAAQKGPFLSKEEINE
RAKIGKGTIEKMSELGILDGMPETNQLSLFDFM
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgccatggcgtacgaacagcagatgtatgaagaacagatgcagtcgcttatg
tatgaggacatgcagatggagccgcagccggtaaacgaagctcctgtgcagaatgttccg
gataaagtccaggcatcagtgcaagatgagccagagaaaactgaaggaaagcatgctgag
acagagtcggacgaaaaagaaaatccggagaggcagctgttttttgatgtgtttggcgga
cttgagatgcctaaggaactggatggactgttccgggaagaggtatatgtaacaagggta
gttatcatagagaacagggagattctgcgagtagatataagttcaagacatataataagc
cgtcctaatattgagaaggctgaggaggcactcagaaagcatatatttggaaagcggcgg
tacacggttcagatcagggaacactatgatctgtctacacagtataatcttgaggctata
gtcagggcgtatgagaagagcattctctacgacatcaagtcattcagtaatgttggatac
aggctgatatcgagatctgttggcgactggtattgtgatgcggacgttataactatagcg
atagaggacagtaaaatagcccatatccatgcggacaagataaagcactacatggaagag
atgttccacgacagatttgacatgaatgtaaatgttgcatttgagtttaatgaggctgac
aaggaaaagctgcgccgggcgagtgcacttgtggagcagcagaagatagatgcgatactt
agtaacctcagagatcatggcgatataatcgttgacggtcaggcggttggaaaggagcag
cttgctgtcagcaagagttcggagaaggctgctggtgagaaaaagacagagacaaaggct
gccctggcaacggctggggacaatgcacagaagcctgcgggcaaggaggcgtttggcagg
agaaagagatattcagatgatcccgatgtgttcatcggaagggatgtggaaggacagctc
cttgagatatccagtatcaatgacggtatcggtgaggtagtcattcacggacagatcatg
aacacggaggaaagggaacttcgaaatggcaagatcattcttacgggatatatcacggat
ttcacggataccataggattcaagatgttctgtagccctgaggatatggaggtctaccgt
gaggagatacaaaagggaaagttctacaggatgaagggcctagccgaatttgactcgtat
gctaaggaagtcatgatctgcagagtactcggaatgaagcatatacaggatttccgtgtg
cctcgtatggatacatatccggagaagagagtcgaactccatatgcacaccaagatgagt
gagatggacagtgtcgtagacatagagacgatagtcaagcgtgccagtgactggggacat
ccagctatagccatcaccgatcacggcgtggttcaggctttccctatagccaatcacaca
aagggactcagaaaagatttcaagataatatacggtgtcgagggatattttgtagatgat
ctcaaagatctggtcaagaattccagaaaccagagtctcgattcagaatatgtagtattt
gatatagagacgacaggactttcaaagaaacacaataagatcatagagataggtgctgtc
aaggtgaaggacggcgaggtcgttgacacgttctcagagtttatcaatccaggcgttccg
atcccataccagatagaacagctcacctccataaacgatgacatggtaaaggatgcacct
atgtatgatgtcatagtaccgagatttgtggagttctgcggtgatgacatagtggtagca
cacaatgcgtcatttgacacgggatttgtaaagaagaatgcggaggaactgggactgagg
ttcgacaatacagttctggacactatgactctcagccacatacttttgccggagcttggc
aaattcaccctggacagagtgtgtaaggaactgaaggtagtaaatgctcatcaccacagg
gctatagatgatgcagaggctacatcaaaggtgttcttcaagctccttgatatgctgaag
gagagggatgtcaagaccatggatgatctgaatgtcctcggaagtacgtcacctgacgcc
ataaaaaaagacaagacataccatggtatcatcctggcaaagaatgagatcggcagggtc
aatctgtacaggctcatctctgagtcgcatcttacgtactttgcgagaagaccgcgtatg
ccgatgagtctcatcaacaaatacagggagggactgatactgggatctgcctgcgaggcg
ggagaactgttcagagccatcgttgacgatgctcccgatgaagagatagtgagactggta
aactggtttgactacctggagatacagcccattggcaacaatgagttcatgacaagggat
actagaaatccaaagaccatggacgatctgatagagtacaacaagaggatagtggagctt
ggcgagatgttcaacaagcctgttgtcgctacatgtgatgtccattttctgaatccggag
gactatatatacagagcgataatcatgaagagcaagggatttgacgatgcggacatgcag
ccgccactctacttcaggacaacggaggaaatgctggcagaattccagtatcttggaagt
gataaggcacgggaagtagtcataaccaacactaacatgatagctgacatggtggagagg
attgaaccagtgagacctgataaggcaccgccaataatcgagaattcggatcagacactt
actgatatatgttacacgaaggcacatcagatatatggtcctgagcttccaccgcaggtt
caggagagactggacagggaactgcactccatcatctcaaatggattcgcggttatgtac
ataattgcgcagaagcttgtgtgggattcaaatgaccacggatatctggttggttcgcga
ggttcggtcggttcttcatttgtcgctacaatggctggtatcacggaggttaatcctctg
tcagcgcactatatatgtccgaagtgccattttgtagattttgactcggagcttgtaaag
tcgtattctggaatgagcggatgtgatatgcctgacagagactgtccaaattgcggaaca
ccactcataaaggaaggacatgatataccattcgaaaccttccttggatttaacggagac
aaggagcctgatatcgatctgaacttctcaggagagtatcagtcgaaggcacatgcctac
accgaggtgctcttcggcaagggcaaggcattcaaggcgggaacagtaggtggtgttgcg
gaaaagacagcatttggatatgtgtacaattatttcaaggatcactccaaagaggaactt
atggcggaggccaaggcgtccggaatggatgaaaaagccgcgaagaagtacgctgaggag
aatgcaacagtcacaaagagaaggtgtgagatggagcgtctggctcttggatgtactggt
gtcagaagaactacgggtcagcatccgggtggtatgatagttctcccgagacacgaggag
atatattcatttacccctatacagcacccggcaaatgatgtgacatcggatatcatcaca
tcgcactttgagtaccattcaatcgatcataacctgcttaagctcgatattcttggacac
gatgatccgaccatgatcaggcgacttgaggatctgacgggacttgacgccacgaagata
agacttgatgacaaggatgtcatggagcttttccacagcacgaagtctttggggatcacc
ccggaggatatcaacggaataccgcttggaagtctgggtgtaccggaattcggaacggat
ttcgctatgcagatgcttatagatgccaagcctacatgtttctcagaccttgtacgaata
gcgggtctggcacatggaaccgatgtgtggctgggcaacgcacaggagctcatcaagtcg
ggcaagtgtaccatatcgacagccatttgttgtcgtgacgatattatggtttatctgata
catatgggacttgatgccggacttgccttcaatatcatggagaaagtccgtaaaggaata
gtagccaagggcaaatgtgacaaatgggaggattggaaggctgagatggcagcccacgga
gtgcctgactggtacgtgtggtcgtgtcagaagatcaagtacatgttcccgaaggcccat
gctgcggcatatgtcatgatggcgtggagaattgcatggttcaaggtcaattatccgctt
gagtactatacggcattcttcagtatcagagctgatgatttcagttatgagatgatgtgc
tttggaaaggagagagttctcttccatatcaatgagataagcaaggtggacaagaacaag
agatcagccaaggacgagggcaagctcaaggatctgaagatagttctcgagatgtacgca
agaggctacgactttgtccctatagatatatacaaggcgaaagccgacagattccagata
atagacggcaagatcatgccatccttcgcatccatagaaggaatgggagagaaggctgcc
cagcagctctacgaggctgcccagaagggaccgttcctctccaaggaggagatcaatgag
cgtgccaagataggcaagggtaccatagagaagatgagcgaactcggaatcctggacgga
atgccagagacaaatcagctgtcgctgtttgactttatgtaa
DBGET
integrated database retrieval system
