Coprococcus eutactus: LK421_07430
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Entry
LK421_07430 CDS
T07943
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cev
Coprococcus eutactus
Pathway
cev03410
Base excision repair
cev03430
Mismatch repair
cev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK421_07430 (recJ)
03430 Mismatch repair
LK421_07430 (recJ)
03440 Homologous recombination
LK421_07430 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cev03400
]
LK421_07430 (recJ)
DNA repair and recombination proteins [BR:
cev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LK421_07430 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LK421_07430 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LK421_07430 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ARM_TT21_2nd
Motif
Other DBs
NCBI-ProteinID:
UEA78650
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Position
1746490..1748382
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AA seq
630 aa
AA seq
DB search
MMRSPEEQQIIDRYVMRPKWTIMSKRADFAEIGRKFGIDPVVARVITNRGICGDDNINMY
LNGGADLLHDPGLMKDLPEGCRIVMDKLENGSRIRIISDYDVDGVTSNYILLLGLRKVWA
QIHGARPEECEIVDYDIPHRIHDGYGIKNRLIDAAKADGVDTIITCDNGIAAFEQIKYAK
TIGMTVIVTDHHQVPYQENGDGTKTYTLPPADAVIDNQRVDCQYPFKGLCGAGVACKFIQ
YLYRLCGIDEREIQEFFEVLGLATNCDMMDLVDENRIFVKYALESLKDSRNPGLNALMRL
SGKNEKKITTYDLGFLIGPCINAAGRLGDARTSLEFLLEKNAAKAETKAAELIQINNDRK
SMTENGVKLITKMLEDATIAGEIGDTATLADHVIVAYIPDVHESVVGIIASKLKEAYSRP
VMIFTDSEHAGILKGSGRSIESYNMYEHLSRVKSYFREFGGHAMAAGFSIESSRLGELRR
VLNEQCALTDEDITPKVRIDVGMPLQYLARQSMRITEQLYLLEPYGKGNRKALFGQANVP
VRKASILGKNRNLLKLVLDIGENQYMEAIYFDPDEFVNNIKQWFGADECDKMLNGRPNKV
VIDMVYYPEINEFRNTRNVQIRLERYDKCD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggtcccctgaagaacagcagataatagacagatatgttatgagacctaaatgg
acgataatgagcaaaagagccgattttgcagagataggcaggaaatttggcatagatccg
gtggttgcaagagtcataaccaacagagggatatgcggtgacgacaatataaatatgtat
ctgaacggtggggcagaccttctccatgatccaggcctgatgaaagatctgccggaggga
tgccggatagtgatggacaagctagagaatggcagcaggatccgtatcatatcggattac
gatgtggatggagtgacatcgaattatatccttctgctcggactcaggaaggtttgggca
cagatccatggtgccaggccggaagagtgtgagatcgtggattatgatatccctcaccgc
atacatgatggatatggaataaagaacaggcttatagatgctgcgaaagcggacggtgtt
gacactataatcacctgcgataacggcatagcggcatttgaacagataaaatacgcgaaa
accattgggatgacggtcattgtcacggatcatcaccaggttccgtatcaggagaacggg
gatggaacgaagacatataccctcccacctgcagatgcagtcattgacaaccagagggtt
gactgccagtatccgttcaaggggctatgtggtgccggcgtagcctgcaagttcatacag
tatctgtacaggctttgtggcatagatgagcgagagatacaggaattcttcgaggtcctg
ggactggcaacaaactgcgatatgatggatctcgttgatgagaacaggatatttgtcaaa
tatgctcttgagagtctgaaggatagccggaatccgggacttaatgctctcatgcggctc
agcggaaaaaatgaaaaaaagataaccacgtacgatctgggattcctcattggcccatgt
atcaatgccgcagggcgcctcggggatgccaggacgagtctggagttcctactggaaaag
aatgcagcaaaggcggagacaaaagcagcggagcttatccagatcaacaatgacagaaag
tccatgactgaaaatggtgtaaagctcataaccaaaatgcttgaggatgcgacgatagca
ggggaaattggcgatacggcgactcttgccgaccacgttatagttgcatacattccggat
gtgcatgagagcgtggtgggaataatagcgagtaagctgaaggaggcatacagcagacct
gtcatgatatttacggatagtgagcatgcggggatactcaagggatcgggaaggtccata
gagagttataatatgtatgaacatctgagccgggtgaagtcatactttagggaatttggc
gggcatgccatggcggcaggattttccatagagagcagtagactgggtgagctgagacgg
gtgctcaacgaacaatgtgcgctcacggatgaggacataactccgaaggtaaggatagat
gtcgggatgccactacagtaccttgcaaggcagagtatgcggataaccgaacagctttac
ctgctcgaaccatatggcaaggggaacaggaaagcgctgtttggacaggcgaatgttccc
gtgagaaaagcgtcaattttgggcaaaaatagaaatttattgaaacttgtgcttgatatt
ggggaaaaccaatacatggaagcgatatattttgatccggatgagtttgttaataatata
aaacagtggtttggtgcggacgaatgtgataaaatgttaaatggccggccgaacaaagtg
gtaattgatatggtgtattatccagagataaatgagtttcgcaatacaagaaatgtccag
ataaggctggagagatatgacaaatgtgattag
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