Coprococcus eutactus: LK421_08160
Help
Entry
LK421_08160 CDS
T07943
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cev
Coprococcus eutactus
Pathway
cev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK421_08160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cev03021
]
LK421_08160
03400 DNA repair and recombination proteins [BR:
cev03400
]
LK421_08160
Enzymes [BR:
cev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK421_08160
Transcription machinery [BR:
cev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK421_08160
DNA repair and recombination proteins [BR:
cev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK421_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UEA78789
LinkDB
All DBs
Position
1915369..1919250
Genome browser
AA seq
1293 aa
AA seq
DB search
MEKNRISPVKSGKGYRMSYAKQKDVLDMPNFIEVQKNSYNWFLTDGLREAFRDISPITDY
SGQYSLEFVDFQFCKNDLKYSIEECKERDATYAAPLRVKVRLRVKDAPDMPEYEIFMGDL
PLMTETGTFVINGAERVIVSQLVRSPGIYYDITHDKVGKKLYACTVIPNRGAWLEYETDS
NDVFYVRVDRTRKVPVTVLIRALGLGTDQEIIDLFGEEPKIMESLNKDPAKSYSEGVVEL
YKKIRPDEPSVVENAESLINAMFFDARRYDLAKVGRYKFNKKLALKARIAGHVLAEDAID
PSTGEVIAEAGTVVSEELADTIQDAAVPYVMIQTEERNVKVLSNMMVNIANYVDFDPAEL
GIVERVYYPVLEGLLEEYGDDTEKLKAAVERDMSDLVPKHITKEDIFASINYNIHLEYGI
GFDDDIDHLGNRRIRAVGELLQNQYRIGLSRLERVVRERMTTQDAESITPQSLINIKPVT
AAVKEFFGSSQLSQFMDQNNPLSELTHKRRLSALGPGGLSRDRAGFEVRDVHYTHYGRMC
PIETPEGPNIGLINSLATYARINEYGFVEAPYRRLDKTDPKNPVVTDEVVYLTADEEDRY
RVVQANEPIDADGHFVRNNVSGRFRADTTEFPKSKVDLMDVSPKMVFSVATSMIPFLQND
DANRALMGSNMQRQAVPLMMTESAVVGTGMEAKAAVDSGVCVVAKRDGVVEYSNSTEICI
RADEDGKKDVYHVIKFARSNQGNCMNQRPIVFKGDHVKAGDVIADGPSTSGGEIALGKNP
LIGFMTWEGYNYEDAVLLSERLVRDDVYTSIHIEKYECEARDTKLGKEEITRDLAGLSND
VLKDLDENGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKV
PHGAFGIVIDAKVFTRADGDDLPAGVDKKVRVYIAQKRKIQVGDKMAGRHGNKGVVSRVL
PVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLGLASQVLGFKVSTPVFNGATEFD
IMDTLEMANDYANGTWEDFEAKYKDTVKPEVMDFLYKNRDHRAEWKGVPINRTGKVQLRD
GRTGENFDAPVTIGYMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGASYTLQEILTVKSDDVIGRVKTYEAIIKGENIPAPGVPESFKVLLKEFQALG
LDVRVVREEDDEDGNKKMVEVDLSETMEAYDYNPSIKRLLSDRSSDRDDSEETEAPEIFR
GDDAAELEANGFSEVDEADMNDDVDSDFVDDEE
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaacagaattagtcctgtcaagtctggaaaaggctacagaatgagctatgcg
aagcagaaggacgtcctggatatgcctaacttcattgaggttcagaagaattcatacaat
tggttcttaactgacggtctgagggaagcatttagggatatttctccaatcactgattac
tctggtcagtatagtcttgaatttgtagattttcagttctgcaagaatgacttgaagtac
agtatcgaggaatgcaaggagagagatgcaacatatgcagctccactcagagttaaggtt
agactcagggtgaaggatgctccggatatgccggaatatgagatcttcatgggtgatctt
ccgcttatgacagagacaggaacattcgttatcaatggtgcagagcgagttatagtcagc
cagttggttcgttcacctggtatctactatgatataactcatgataaggttggtaagaag
ctgtatgcatgtacagttattccgaacagaggtgcatggctggagtacgagactgattcc
aacgatgtattctatgtccgtgttgatagaactagaaaagtaccagtaactgttcttatc
cgtgcacttggtcttggaacagatcaggagatcatagatttgtttggcgaggagccaaag
atcatggagagccttaacaaggatcctgcaaagtcatactcagagggtgtagttgaactt
tacaagaagatcagaccagacgagccttcggtagtggagaatgcagagagccttatcaat
gccatgttctttgatgctagaagatacgatctcgccaaggttggacgttataagttcaac
aagaagcttgcccttaaggcccgcattgcaggacatgtgctggctgaggatgctatcgat
cctagcacaggagaggttatagctgaggcaggtacagtagtatcagaggagcttgctgac
acaattcaggatgctgcagttccatatgtaatgatccagactgaggagagaaacgtgaag
gttctttccaatatgatggttaatatagcaaattatgttgactttgaccctgctgagctg
ggcatagttgagcgtgtatactatccggttcttgagggactccttgaggaatatggtgat
gacacagagaagctgaaggctgcagttgagcgcgatatgtcagaccttgtgccaaagcac
atcacaaaggaagatatatttgcatctatcaactacaatattcatcttgagtatggcatt
ggatttgatgatgatatcgatcatctgggcaacagacgtatcagagcggttggagaactt
cttcagaaccagtacagaatcggtctttcaagacttgagagagtcgtaagagagagaatg
acaacacaggatgctgagtctataacacctcagtcccttataaatatcaagcctgtaaca
gctgcagttaaggagtttttcggaagttcacagctgtcacagtttatggatcagaataac
cctctgtcggagctgactcacaagagaagactttcagcccttggccctggtggactttca
cgagatagagccggattcgaggttcgagatgtacactatacacattacggtagaatgtgt
cctatcgagacccctgagggacctaacatcggacttatcaactcgctggctacatatgcg
cgtatcaacgagtatggttttgttgaggctccatacagaagacttgacaagacagatcct
aagaatcctgtagtaactgacgaggtagtatatctcacggctgatgaggaagacagatac
agagtagtacaggctaatgagcctatagatgccgacggacattttgtaagaaacaacgta
tcaggtagatttagagctgatacgaccgagttccctaagtccaaggtagaccttatggat
gtatcacctaagatggtattctcagttgctacatctatgattcctttcttacagaacgat
gatgctaaccgtgcccttatgggatctaacatgcagcgtcaggcggttcctcttatgatg
acagagtcagctgtggttggaacaggaatggaggcaaaggcagctgttgattcaggtgtc
tgcgtagttgccaagagagatggtgttgttgagtattcaaacagcacggaaatctgtata
agagcagatgaggatggcaaaaaggatgtataccatgttattaagtttgcacgaagcaat
cagggtaactgtatgaaccagagacctatcgtgttcaagggcgaccatgtcaaggctgga
gatgttattgctgatggtccttcaacatcaggtggagagatcgcacttggtaagaaccct
cttatcggatttatgacatgggaaggttacaactacgaggatgcggttcttctcagcgag
agacttgtaagagatgatgtatatacatctatccatatcgagaagtacgagtgtgaggct
cgtgatacaaagcttggtaaggaagagatcacaagagatcttgcaggactttcaaatgac
gttctcaaggatcttgatgagaatggtatcatcagaatcggtgctgaggttcgtgccggt
gatattcttgtcggtaaggtaactccgaagggagagacagagctcacagcagaggagaga
cttcttcgtgctatctttggtgagaaggcaagagaggtaagagatacatcactgaaggtt
ccacacggagcgttcggtatagttatagatgcaaaggtatttacacgtgctgacggagat
gatcttccggcaggtgtagacaagaaggttcgagtttatatagcacagaagagaaagata
caggtcggagataagatggctggtcgtcatggtaacaagggtgtagtttcacgagtgctc
cctgttgaggatatgccattccttccaaatggtcgtcctcttgatattgtgcttaatcca
ctgggtgttccttcacgaatgaatatcggacaggttcttgagatacatcttgggcttgct
tcacaggtccttggcttcaaggtatcgactccggtattcaacggtgcaaccgagtttgac
atcatggatacactggagatggcaaatgactatgcaaatggtacttgggaagactttgag
gccaagtacaaggatacagtaaaaccggaagttatggacttcctttacaagaatagagat
cacagagcagagtggaagggtgtacctatcaacagaacaggtaaggttcagctccgcgat
ggtagaacaggagagaactttgatgcacctgtaactattggttacatgcattatctcaaa
ctgcaccatttggttgacgataagatccacgctcgttcaactggtccgtactcactcgta
acacagcagccactgggtggtaaagctcagttcggtggacagagatttggagagatggag
gtttgggctcttgaggcttatggtgcttcatatacactgcaggagattctgacagttaag
tctgatgatgttatcggacgtgtgaagacatatgaggctatcatcaagggcgagaacata
cctgcaccaggagttcctgagtcgttcaaggttcttctcaaggagttccaggcactcgga
cttgatgtaagagttgtcagagaggaagatgatgaggatggtaataagaagatggtagaa
gtagatctcagcgagactatggaagcatacgattacaatccaagtatcaagaggcttctc
agcgacagatcgtcagacagagatgattcagaggagacggaggcacccgagatattcaga
ggcgatgatgctgctgaacttgaggccaacggattctcagaggttgacgaagcggatatg
aatgatgacgtcgattcagattttgtggatgatgaagaataa
DBGET
integrated database retrieval system
