Coprococcus eutactus: LK421_11615
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Entry
LK421_11615 CDS
T07943
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cev
Coprococcus eutactus
Brite
KEGG Orthology (KO) [BR:
cev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cev03400
]
LK421_11615
Enzymes [BR:
cev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK421_11615
DNA repair and recombination proteins [BR:
cev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LK421_11615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Exonuc_VII_L
ATPase_2
DUF1110
ISG65-75
Motif
Other DBs
NCBI-ProteinID:
UEA79416
LinkDB
All DBs
Position
2653104..2656853
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AA seq
1249 aa
AA seq
DB search
MGVQFVLGPAGSGKTEYMLKTIIEESMLHDDMSYLYIVPEQFSMEAQRDIVTRHPRHGSM
NIDAIGLNRLAYRVFDELSINPGQVLEDFGKSMLVKRILMENQDDLLMYGNYMDKMGFVD
EMKSMMSELFQYAVDREEIDMAMEQMDSESSTYRKLHDIRLIYEKFEEHNANDQYIVAEQ
LSQLLAANVEKSQFISKSHMYFDGFTGFTPVQMKLVTQLMSHAASVTFAFDIDPDRIGLA
KPKEYELFRLTKETIAAICKAAADVHVDILDNVVMCGQGEIPYRFRDDPCLAAFERNIFR
YPHQKINGAADSIKLVRTDRARDEALYVASQIRKLVREKGYRYKDIAVVAGDLHDVAGYY
RQAMDEYRIPVFIDENTALRGDPCSDTVRAFLAVMSDNFSFNSVFRLLKSGMTEVAYMDV
ERMENYALKRNLRGYKSWLKEITDKNNSDYAQEMDSIRRQIVSIFGEDCIDVYKPSSPNS
KDTVTNYTKELYNFLDELHVCEKLEERRKRLYEEKLFDEGDAYGQIFDKIVALFDKVVTI
LGDEKMTVKEYAGVLEAGISDMEIGIVPPTIDRVVVGDMTRSRLNHVKALFFTGVNEGII
PKPAKKGKILSNGDRQNLEKCGVTLAPSDKTNAYIEQFYIYTSLTKPSDNLYIVFRKMGE
DMNAVGPSYLVDRIRNIFPDIEIEDYDLDSQIPETVNGALRYLVSRYDEVGSDGTLQAVK
RLIEQQGGNTEYATWLGAMQSGYDYVNETKTLSPETVRLLYGTELTESVSKLEKYAECQF
KYFLQYGLGLMDRETYQLNAANVGIILHSSMQKMFEYIKTKCGNNWADITETELADRAVE
FVDASADDEAAEYFEDSSRAAYVKKFLEDIAVRTAKTLRTFVLCGDMHPENFERYFDTSK
LGDGIENYIFKLPNGMTMSLKGVIDRVDEYVSDGDVYFKIIDYKSSDQKIDKDRVLAGLQ
MQLVTYGAIAYELEKRRMNELGRSSEQVHVGGLLYYTFDDPIVDMTDFDGDIRYDEESQE
LVTDEKRTFGRFQVDAIESGLLDASKYAGIYNGSSRAVSIMDSTQATLVGKQAMEEVMIK
ALMEANRRNIDRLGTCIADGKIAINPVKQGNRSACTYCSYRHVCMFDSKYGGNSYSKMYD
GEKKAYNDSQKAIDEVLSGLAEADKKIKSAEKKLASASKKYETAEEKVTSRGDKATAKMR
ENLESATTALEEAKNALKAARGEAEQLRSRAVELGVTDIENGGDVDGEQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggggtacagtttgtccttggaccggcaggatccggcaagacagagtacatgttaaaa
acaattatagaggagtcaatgctgcatgatgatatgagctatctgtacatagttccggag
cagttcagcatggaggcacagagagatatagtcaccaggcatccaagacacggttctatg
aacattgatgccataggtttaaacaggcttgcatacagagtgtttgacgagttatccatc
aatccggggcaggtgcttgaggattttgggaaaagtatgctcgttaagcgtatccttatg
gagaaccaggatgatctgctcatgtatggcaattacatggacaagatgggatttgtagac
gagatgaaatctatgatgtcagagctgttccagtatgcggtggacagggaagagatagat
atggctatggagcagatggacagtgagagttcaacatacaggaagctccacgacataaga
ctcatctatgagaagttcgaggagcacaatgcaaacgaccagtatatcgtggcggagcag
ctctcccagcttctagctgcaaatgttgaaaagtcgcagtttatatcgaagagtcatatg
tattttgacggatttacagggtttaccccggtgcagatgaaactggtaacacagcttatg
agtcatgctgcaagtgtaacatttgcatttgacatagatccggacaggataggactcgca
aaaccaaaggaatatgaactgttcaggctgacgaaggagaccatagcggctatatgtaag
gctgcggcagatgttcacgttgacatcctggacaatgtagtgatgtgcggacagggggag
atcccatacagattcagggatgatccatgtcttgcggcatttgagcggaacatattcaga
taccctcatcagaagataaatggagcggcggacagtataaagctcgtgagaacagacagg
gcgagagatgaggctctgtatgttgcatctcagatcagaaaactggtcagggagaagggg
tacagatacaaggatatcgctgttgtagcaggtgatcttcatgatgtggcagggtattac
agacaggccatggacgagtacaggatccccgtgtttatagatgagaatacagcactgagg
ggagatccttgttcagatacagtgagagcattccttgctgtcatgtctgataatttctcg
tttaacagtgtgttcaggctgctcaagtccggcatgacagaggtggcgtatatggatgtt
gagcgcatggagaactatgccttaaaacgcaatctcaggggatataagtcatggcttaag
gagataacggacaagaataacagcgattatgcgcaggagatggattcaataaggagacag
atagtgtcaatatttggcgaagattgcatcgatgtgtacaagccgtcaagcccgaattcc
aaagatactgtcacaaattataccaaagagctttataacttcctcgatgaactgcatgtg
tgtgaaaagcttgaggagcgcagaaaaagattgtacgaggaaaagttgtttgatgagggc
gatgcgtacggtcagatatttgacaagatagttgctctgtttgacaaagtcgttacaata
ctcggcgatgagaagatgactgtcaaggagtatgccggagtccttgaggccggaatatca
gatatggagatcgggatcgttcctccgaccatagatagagtagttgtgggcgacatgaca
agatcgagactgaatcatgtgaaggctctgtttttcactggcgtgaatgaggggataata
ccgaagccggctaagaagggcaagatactctcaaacggtgacagacagaatctagaaaaa
tgcggtgttacacttgcaccatcggacaagacaaatgcatatatagaacagttctatata
tacacgagcctcacaaagccgtcagacaatctgtatatcgtattcagaaagatgggtgag
gacatgaacgcagtcggtccgtcctacctcgtcgacaggataagaaatatcttcccggac
atagagatagaggattatgaccttgacagtcagataccggagacggtgaatggagcgctc
agatatttggtgagcagatatgatgaggttggcagtgatgggacactccaggcggtaaaa
cgccttatagagcagcaaggaggaaacactgagtatgcgacatggcttggagccatgcag
agcggatatgactatgtgaatgagacaaagacgctctctccggagactgtgaggttgtta
tatggaacagagctcacggagagcgtgtccaaacttgaaaaatacgcagaatgtcagttt
aaatatttcctgcagtatggactcggtcttatggacagggagacatatcagctgaatgct
gcaaatgtcggaatcattctgcatagctccatgcagaaaatgtttgaatatatcaagaca
aaatgcggtaacaattgggctgatatcacggaaacagagcttgctgacagagctgtggag
tttgtagatgcctcggcggatgatgaggcggcagaatactttgaggattcgagcagagcg
gcgtatgtgaagaagttccttgaggatatcgcggtgagaacagcgaaaacactgagaaca
tttgtgttgtgcggagatatgcatccggagaactttgagagatactttgatacctcaaag
ctgggagacggcatagagaactatatattcaaactgccaaacggaatgacgatgagcctt
aagggtgttatagacagagttgacgagtatgtgagcgacggagatgtctatttcaagatc
atagactacaaatcatcagatcagaagattgataaggacagggtgctggctggacttcag
atgcagcttgtgacctacggcgctattgcatatgagcttgagaaacgaaggatgaatgag
cttggacgctcatctgagcaggtgcatgtaggcggtcttttgtattatacatttgatgat
ccgatagtggacatgacggactttgacggggatataagatacgacgaggaaagtcaggag
ctggtcacggatgagaagcggacatttggcaggtttcaggtggatgctatagagagcggg
ctgttggatgcgtcgaagtatgccggaatatacaatggcagcagtcgggcagttagcata
atggacagcacacaggcaacactggtggggaagcaggccatggaagaggttatgataaag
gcgcttatggaggcaaatcgcaggaacatagatagacttggcacatgcatagcggacggt
aagatcgccatcaatcccgtaaagcaggggaacagaagcgcgtgtacctattgctcatac
agacatgtgtgtatgttcgacagcaaatacggcggaaattcatattccaaaatgtatgat
ggggaaaagaaggcgtataacgacagtcagaaggctatcgatgaggttttgagcggactc
gcggaggcagataaaaagataaagtctgcggagaaaaaactcgccagtgccagcaaaaaa
tatgaaactgcggaggaaaaagtcacgagccgtggggacaaggcaactgcgaagatgcgt
gagaaccttgaaagtgcaacaacagctctggaggaggctaagaatgctcttaaggcagcc
cgcggggaggctgagcagctaaggagcagggctgtggaacttggtgtaacagatatagag
aatgggggcgacgtagatggggagcaataa
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