Cellulosilyticum sp. WCF-2: EKH84_02890
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Entry
EKH84_02890 CDS
T06333
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cew
Cellulosilyticum sp. WCF-2
Brite
KEGG Orthology (KO) [BR:
cew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cew03032
]
EKH84_02890 (gyrB)
03400 DNA repair and recombination proteins [BR:
cew03400
]
EKH84_02890 (gyrB)
Enzymes [BR:
cew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EKH84_02890 (gyrB)
DNA replication proteins [BR:
cew03032
]
Prokaryotic type
DNA Topoisomerases
EKH84_02890 (gyrB)
DNA repair and recombination proteins [BR:
cew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EKH84_02890 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
EIIBC-GUT_N
UFD1_N2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QEH67438
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Position
661227..663131
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AA seq
634 aa
AA seq
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MAATYDENQIQILEGLQAVRKRPGMYIGSTSSKGLHHLVYEIVDNAVDEALAGFCSFIKV
TIHADNTISVIDNGRGIPVGIHPQKGISTVEVVFTILHAGGKFGGGGYKVSGGLHGVGAS
VVNALSEWLTVEVYTDGKVHQEKFSRGDVVQPLTVIGDTDKVGTYVRFKPDTEIFEEVIF
DYKVLEQRLKETAFLTKALKIQLVDEREGQEQNKTFHYEGGIKEFVQHLNKHKTPIYDEI
FYCEGEKDGIAVEVAFQHNDSYVENLFSFVNNINTPEGGTHLSGFRTAITKNLNDYARKM
GLLKDSDKNLTGDDIREGMTAVISIKIGDPQFEGQTKTKLGSSEAAGAVQSVFGDQLTYF
LEQNPNVGKVIVQKGVMAARARDAARKARELTRRKSALEGNALPGKLADCSEKDASKCEI
YIVEGDSAGGSAKSARSPKTQAILPLRGKILNVEKVRIDKMLENQEIRNMITAFGAGISD
DFDISKLRYGKIILMTDADVDGAHIRTLLLTFLYRYYRELIEQDHVYIAQPPLYLVEKNK
KKHYAFDDKELEKLLEEVGRTGITRMQRYKGLGEMNAEQLWETTMDPESRVLVKVNIDDA
AAADEIFTKLMGDDVEPRRQFINEHAHKVTYLDI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgtacgatgaaaatcaaatacaaatattagaggggctgcaggcggtacga
aaaaggcctggtatgtatataggcagtacctcttccaaaggtcttcaccatctagtatat
gagatagtagacaatgcagttgatgaggcattagctggattttgtagctttattaaagtt
acgatacatgcagataatacaatatctgttatcgataatgggcgtggtattcctgtagga
attcacccacaaaaaggcatatcaacagtagaagtcgtatttaccattttacacgcaggt
ggaaaatttggtggtggaggttataaggtatctggaggtttacatggtgtaggtgcatca
gtagtaaatgcactttcagaatggcttacagtagaagtgtatacagatggaaaagtacac
caagaaaagttttcaagaggtgatgtagtacaacctctcactgttattggtgatactgat
aaagttggaacttatgtacgttttaaaccagatactgagatctttgaagaagttattttt
gattataaagttttagaacaacgcttaaaagaaactgcgtttttaactaaagctcttaag
attcaactagtagacgagagagaaggtcaagagcaaaataagaccttccactatgaaggt
ggtattaaggagtttgtacaacatcttaataaacataaaacacctatctatgacgagatc
ttttattgtgaaggagagaaggacggaatagcagtagaagtagcgttccaacacaatgat
agttacgttgaaaacctttttagttttgttaataatataaatacaccagaaggtggaact
cacctttcaggatttagaacggcaattacaaaaaatctaaatgattatgcaagaaaaatg
ggtcttttaaaggactcagataaaaacctaacaggagatgatatccgtgagggtatgact
gctgttatcagtattaaaatcggagatcctcaatttgaaggacaaactaaaaccaaactt
ggatctagtgaagcagctggagcagttcaatctgtatttggtgaccaattaacttatttc
cttgaacaaaatcctaatgtaggaaaagtaattgttcaaaaaggtgtaatggcagcaaga
gctagagatgcagcacgtaaagcaagagagcttacacgtagaaagagtgctttagaggga
aatgcccttccaggcaaacttgcagattgttcagaaaaagatgcttcaaaatgtgaaata
tatattgtcgaaggggattcagctggtggttctgcaaagagtgcacgttcccctaaaaca
caagcaatcttaccacttagaggtaaaattcttaatgtagaaaaagttagaattgataag
atgctagaaaatcaagaaatccgtaatatgattacagcgtttggtgctggaattagtgat
gactttgatattagtaaattaagatatggaaaaatcattctcatgactgatgccgacgta
gatggtgcccatattaggacccttctacttacattcttatacagatactatagagaactt
attgagcaagaccatgtatacattgctcaaccaccactttatttagttgaaaaaaataag
aaaaagcattatgcatttgatgataaagaattagaaaagttactcgaagaagttggtaga
acaggtattacccgtatgcaacgatacaaaggtctaggagagatgaatgctgaacagctt
tgggaaacaactatggatcctgaatcaagagtacttgttaaagtaaatattgatgatgca
gcagcagcagatgaaatctttactaagcttatgggtgatgatgttgaaccaaggcgccag
ttcattaatgaacatgctcataaagtaacttatctagatatttaa
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