Cellulosilyticum sp. WCF-2: EKH84_03510
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Entry
EKH84_03510 CDS
T06333
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cew
Cellulosilyticum sp. WCF-2
Pathway
cew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKH84_03510 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cew03019
]
EKH84_03510 (recQ)
03400 DNA repair and recombination proteins [BR:
cew03400
]
EKH84_03510 (recQ)
Enzymes [BR:
cew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKH84_03510 (recQ)
Messenger RNA biogenesis [BR:
cew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EKH84_03510 (recQ)
DNA repair and recombination proteins [BR:
cew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EKH84_03510 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
GerE
Motif
Other DBs
NCBI-ProteinID:
QEH67526
UniProt:
A0A5B9Y8J5
LinkDB
All DBs
Position
797412..799613
Genome browser
AA seq
733 aa
AA seq
DB search
MNPLNILKKYYGYDAFRPGQEELIQAILSGKDALGIMPTGGGKSICYQVPALLLDGVTIV
ISPLISLMKDQVDTLKEYGIEAELINSTLSTKEFREIRANARMGAYKLLYVAPERLETES
FMDLIREVPVSMVAVDEAHCVSQWGHDFRPSYRRVSQILYALPKRPIVAAFTATATPLVK
EDIIKLLELNKPFELTSSFDRPNLYFEVRKPENKLHETEMYLREHVGESGVIYCATRKGV
DDLYERLLRLGLPCTKYHAGLSEAERSSNQDDFLYDRVSVMIATNAFGMGIDKPNVRFVL
HYNMPKNMEGYYQEAGRAGRDGEEAQCILLFGTQDIMTNRYLIENANGLGRQIEYDKLNS
MVDYCNTESCLRNYILNYFGQQTLEEDCHHCGSCNNDTEESDITVEAQKILSCVKRMKER
FGSTQVADVLKGSNTQKIKSFKFNELTTYGVMKDYPKDTIKELISFLVAEGYLQLVGTQY
PIIQLTEASYEVLKGKKPVTIKRILVKETTPVRSRSGLDAKVDLVLFEKLRSVRYDIAHK
QHIQPFMVFPDTTLKEMSSRYPTTDEALLQVSGVGEHKLNKYGQDFIAIIKTYVDENNID
ISKALASLSKKHSEPLSNLEGEATLDGNTIPKKSSPRDSHKLTYELYMQGKGIHEIADER
NLTQMTVENHLIKCVQEGLPIDFTQFIPSEYEEQIIEAIEECGATLLKPIKEMLPEEVTY
TAIKFALIKYGKS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattaaatatactaaagaaatattatggttatgatgcctttagacctgggcaa
gaagaattgattcaggctatcttatcaggcaaagatgcattagggattatgccaactggt
ggggggaaatccatatgctatcaagtaccagcacttttattggatggagtgactattgtt
atttctcctcttatttctttgatgaaagatcaagtagatacacttaaagagtacggcatt
gaagcagagcttattaattctactctaagtacaaaagaatttagagaaattagagccaat
gctagaatgggagcatacaagcttttatatgtagcaccagaacgtctagagactgagagt
tttatggatttaataagggaggttcctgtttctatggttgcagtggatgaagcccattgt
gtgagtcagtggggacatgacttcagacctagttatagaagagttagtcaaatactttac
gctcttcctaagagaccgattgtagccgcttttacagcaacagcgacgcccctcgtcaaa
gaagatattattaagcttttagaactcaataaaccatttgagttaaccagtagttttgat
agacctaacctttattttgaagtaagaaagccagaaaataaacttcacgaaactgaaatg
tatctaagagaacatgttggtgaaagtggtgtgatttactgtgcaaccagaaaaggtgta
gatgatctctatgaaagactacttaggttaggtttaccatgtacaaaatatcatgcgggt
ttaagtgaagctgagcgaagtagcaatcaagatgactttttatatgatagagtatcagtg
atgattgcgactaatgccttcggaatggggatagataaacccaatgtaagattcgtatta
cattataatatgcctaagaatatggaaggctattatcaagaagcaggtcgtgcgggtcgt
gatggagaagaagcacagtgtattttactttttggtacacaagatattatgactaatcgt
tatttaattgaaaatgctaatggattgggcagacaaatagaatatgacaagttaaatagc
atggttgattactgtaatactgaaagttgccttagaaactatattttaaattattttggt
cagcaaaccctagaagaagattgtcatcattgtggtagctgtaataatgatacggaagaa
tcggacatcacagtagaagcacaaaaaatcctgagttgcgttaaacgaatgaaagaacgt
tttggtagtactcaggtagcagatgtactgaagggatcaaatactcaaaaaatcaaaagc
ttcaaatttaatgaacttactacttatggagtaatgaaggactatccaaaagatacaatt
aaagaattaatctcatttttagtagcagagggctatttacaattagtaggcacccaatat
cctattatccagcttacagaagcgagttatgaagtattaaagggaaaaaagccagtcacc
attaagcgtattttagtcaaagaaacaacaccagtaagaagtagatctggattagatgca
aaggtagacctagttttatttgagaaacttagaagtgtacgatatgatattgctcataaa
cagcatattcagccgtttatggtatttccagacaccactttaaaggaaatgagcagtaga
tatcctacaacagatgaagcacttcttcaagtatcaggagtaggagaacataagttaaac
aaatatggccaagactttatagccattattaaaacttatgtagatgagaataatatagat
attagtaaagcgttagcttcattaagtaagaaacattccgaaccactatctaatctggag
ggagaagctactttagatggaaataccataccaaagaaatcatcacctagagatagtcat
aaattaacctatgagctttatatgcagggaaagggaattcatgaaatagctgatgaaaga
aatcttactcagatgacagtggaaaatcatcttataaaatgtgtccaagaaggattgccg
atagattttacacagtttataccatcagaatatgaggaacaaattatagaagctattgaa
gagtgtggtgctaccctgcttaaaccgattaaagaaatgttacctgaagaagttacgtat
actgctattaagtttgcacttataaagtatggcaaatcatag
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