Cellulosilyticum sp. WCF-2: EKH84_13305
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Entry
EKH84_13305 CDS
T06333
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cew
Cellulosilyticum sp. WCF-2
Brite
KEGG Orthology (KO) [BR:
cew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cew03009
]
EKH84_13305 (rlmD)
Enzymes [BR:
cew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EKH84_13305 (rlmD)
Ribosome biogenesis [BR:
cew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EKH84_13305 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
PrmA
Methyltransf_11
DREV
N6_N4_Mtase
Methyltransf_23
FtsJ
Methyltransf_32
TRM5-TYW2_MTfase
PCMT
TPMT
RrnaAD
Methyltransf_4
NodS
DOT1
Motif
Other DBs
NCBI-ProteinID:
QEH69318
UniProt:
A0A5B9YD90
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All DBs
Position
2976718..2978073
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AA seq
451 aa
AA seq
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MAKKNQIIEGIVSHSIFPNKGVVYYEEQPIYVTGAFKGQHIKARLFKRKKGTWEAQLLEV
LENPTYFVEAPCSYFGMCGGCSAQNLDYDEQIHLKHEQVKELLTKAGISDYEDLGVIGSP
EALAYRNKMEFSFGDEVKDGPMTLGMHRKHSTYDVITVDGCLLVDEDFSTILRTILDYCK
DNDLNYYKKMQHTGFMRYVVIRKSITFGEILVNIVTSSQKDFSFIPLATLLAQLPLNGEL
TGVIHTITDNLADAIKPEKVSVIYGQDTIREQILGLQFNISPFSFFQTNTKGAELLYKNA
LSLIDDMDNKTVFDLYCGTGTITQIMATRAKKVYGIEIVEEAIDKAKENAIFNHLTNCHF
IAGDVMVEVDQLKETPDIIVLDPPRDGIHPKAIQKIINFGAKELLYISCKPTSLTRDLPI
LKEAGYHIDKVLCVDMFPQTPHVETVVKLSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaaatcaaataattgaaggcattgtgtctcatagtatattccctaataaa
ggggttgtttattatgaagaacagcctatttacgttacaggtgcttttaaaggccaacat
attaaagcacgtttatttaagcgcaaaaaaggaacttgggaagcacagcttctagaagtc
cttgagaatccgacttattttgtcgaagcgccttgctcttattttgggatgtgtggtggt
tgtagcgctcaaaaccttgattatgatgagcaaattcatttaaaacatgaacaagtcaaa
gaactacttaccaaagcaggtatctctgactatgaagatttaggtgttattggaagtcct
gaagctttagcgtatagaaataaaatggagtttagctttggagatgaagtcaaagatggt
cctatgactttaggtatgcaccgtaaacatagtacctatgatgtgattacagtagatggt
tgcctcttagtagatgaggactttagtacaatactacgaactattttagactactgtaag
gataacgatttaaattactataagaaaatgcagcatactggattcatgcgttatgttgtt
attcgtaagtctattacatttggtgaaatattggttaatattgttacttcatctcaaaaa
gatttttctttcatacctttagcaacactattagcacagcttcctcttaatggagaacta
acaggtgtaatccataccattacagataatttggctgatgcaattaagccagaaaaagta
tctgtcatttatggacaagatacaattagagagcagattctagggttgcagtttaatata
tcaccattttctttcttccagacgaatacaaagggagcagaactcctttataaaaatgcg
ctttcccttattgatgatatggataataaaactgtatttgacttatactgtggtacaggt
accatcactcaaattatggctactcgcgcaaagaaagtctatggcatcgagattgtagaa
gaagcgattgataaggccaaagaaaatgctatttttaatcatttaaccaactgtcatttt
attgcaggtgatgttatggtagaagtggatcaattaaaagaaacaccagatatcatcgta
ttagatccaccaagagacggtattcatccaaaagcaattcaaaagattattaactttggt
gctaaagaactactttatatttcatgtaaaccaacttcattgacaagagacttaccaatt
ttaaaagaagctggatatcacattgataaagtgctttgcgtggatatgtttccacagaca
ccacacgttgagacggtagtgaagcttagtaagtaa
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