Cellulosilyticum sp. WCF-2: EKH84_14660
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Entry
EKH84_14660 CDS
T06333
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cew
Cellulosilyticum sp. WCF-2
Pathway
cew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKH84_14660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cew03019
]
EKH84_14660
03016 Transfer RNA biogenesis [BR:
cew03016
]
EKH84_14660
Enzymes [BR:
cew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EKH84_14660
Messenger RNA biogenesis [BR:
cew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EKH84_14660
Transfer RNA biogenesis [BR:
cew03016
]
Prokaryotic type
tRNA degradation factors
EKH84_14660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
Ribosomal_L6
SPATA25
OB_RRP5_4th
KH_2
Motif
Other DBs
NCBI-ProteinID:
QEH69562
LinkDB
All DBs
Position
complement(3273957..3276074)
Genome browser
AA seq
705 aa
AA seq
DB search
MVKKYSTQLAGRELSVEIGKVAGLANGSATVRYGDTMILATVVAADAPKEGIDFFPLSVN
YEEKFYSVGRLPGGYIKRESRPSEKAILTSRVIDRPMRPLFPKDYRNDVVITTTVLSVDQ
DCSPEVTAMIAASLVVDISDIPFAGPVGSVQVGLVDGNLVFNPNQEERQKSDLALTVSST
KDKVMMIEAGANEVPEDIMFDAIMKGHEFNQQVVQFIEAIKEDCGKAKNEDYIKFGVPAE
IYNEIVSHIGDKQMEEAVFTDDKQVREVQLKALKEKVIAALTEAGKEEDLVYLEEAFYQF
EKKTVRRMILKESKRPDGRALDEIRPLAAEVDLVPRVHGTGLFTRGQTQVLTVTTLATLS
EMQTLDGLDELEISKRYMHHYNFPPYSVGEARAPRAPGRREIGHGALAERALVPVLPTEQ
EFPYAIRTVSEVLSSNGSTSQASICGSTLSLMAAGVPIKAPVAGISVGLVTGETADDFVL
LTDIQGLEDFFGDMDFKVGGTHKGITAIQMDMKIKGLTPEIIKGALENTKKARFYILDEI
MLKAIPAVRDHLSPYAPVITQITIDPEKISEVIGPKGKMINRIIEETGVKIDIEDDGRVF
ICGSDADKAQKAIQMIEGIAKPIEEGQEFDGKVMRLMNFGAFVELVPGKEGLVHISQLAH
ERVAKVEDVVAVGDSIKVKVIEIDKQGRINLSHKVLLPKPEKEKE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaatattcaacccaattagctggaagagaactttcagtagaaattggaaaa
gtagcaggccttgcgaatggttcagcaacagtaagatatggtgacacgatgattttagca
acagttgttgcagcagatgcacctaaagagggcattgatttcttccctttaagtgttaac
tatgaagaaaaattctattctgtaggtagattaccaggtggttatattaaacgtgagtct
agaccttcagaaaaagctattttaacatcaagagttattgatagaccaatgcgtccatta
tttcctaaagattatcgtaatgatgttgtgattacaacaactgtactatctgtagatcaa
gactgtagtccagaagtaacagctatgattgcagcatctttagtagtagatatatctgat
attccttttgcaggtccagtaggttctgtacaagtgggattggtagatggtaatcttgta
tttaacccaaatcaagaagaacgccaaaaatcagacttagctcttacggtttcttcaact
aaagataaagtcatgatgattgaagcaggtgccaatgaagtacctgaagatataatgttt
gatgccattatgaagggccatgagtttaatcaacaggtagttcagtttattgaagcgatt
aaggaagactgtggaaaagctaaaaatgaggattatattaaatttggtgtaccagctgag
atttataatgaaatagtttctcatattggcgataaacaaatggaagaagcagttttcact
gatgataaacaagtaagagaagtacaactgaaggcattaaaagagaaggttattgcagct
ttaactgaagctggtaaagaagaggatttagtttatctagaagaagctttctaccaattt
gaaaagaaaacagttagacgtatgattttaaaagagtcaaagcgtccagatggtcgtgca
ttagatgaaatcagaccacttgcagcagaggtagatttagtgccacgtgttcatggtaca
ggtttattcactagaggccaaacacaagtgcttactgtaacaactttagcaactttatct
gaaatgcagactttagatggattagatgaattagaaatttctaaacgttacatgcatcac
tataacttcccaccttattcagtaggagaagcaagagcaccacgtgctccaggacgtcgt
gaaattggacatggtgctttagcagaacgtgcattagtgcctgtattaccaactgaacaa
gaattcccatatgctattcgtactgtatcagaagtacttagctcaaatggatcaacttca
caagcaagtatctgcggttcaactttatcattaatggctgcaggtgtacctattaaagca
ccagttgctggtatttcagtaggacttgtaacaggagaaacagctgatgatttcgtactt
cttacagacattcaaggattagaagatttctttggagacatggactttaaagtaggtggt
acacacaaagggattacagctattcaaatggatatgaagatcaaaggtcttacacctgaa
attattaaaggtgccttagaaaatacaaaaaaagcaagattttatattttagatgaaatc
atgttaaaagcaattccagcagtaagagatcatttatctccttatgcaccagttattaca
caaatcactattgatccagaaaagattagtgaagtaattggaccaaaaggtaaaatgatt
aatcgtattattgaagaaacaggcgttaagattgatattgaagacgatggacgtgtcttt
atttgtggttcagatgctgataaagcacaaaaagcaattcaaatgatcgaaggtattgct
aagccaatcgaagaagggcaagaatttgatggtaaggttatgcgtctcatgaattttggt
gcttttgtagaattagtgccaggtaaagaaggacttgttcatatttctcaattagctcat
gaacgtgtagcaaaagtagaagatgtagtagctgttggtgattctattaaagtaaaggta
atcgaaatcgataaacagggtcgtattaatttatctcacaaggtacttcttccaaagcca
gaaaaggaaaaagaataa
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