Cellulosilyticum sp. WCF-2: EKH84_14945
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Entry
EKH84_14945 CDS
T06333
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cew
Cellulosilyticum sp. WCF-2
Pathway
cew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKH84_14945 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cew03019
]
EKH84_14945 (rny)
Messenger RNA biogenesis [BR:
cew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EKH84_14945 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF7644
KH_KhpA-B
Fez1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QEH70986
UniProt:
A0A5B9YIK0
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Position
complement(3323577..3325121)
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AA seq
514 aa
AA seq
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MGLIIGIIVVIIIVGIIAFFSGASYRKHIAEAQIGTAEEKSRKIIDDAIKAGEAKKREVL
LEAKEENIRVKNELDKEVRERRNELQQMEKRLLHKEENIDRKTVTLEQKEEQLQRKIDKA
DKTREEAEALHQKQLEELERISGLTLTEAKQYLLRTIEEDVRHESAIMIKEIEAKTKLEA
DKKAKEIITNAIQKCAVDHVVDTTVSVVPLPNDEMKGRIIGREGRNIRTLETLTGIDLII
DDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAKKEVEVLIREEGEAA
TFETGVHGLHPELIRLLGKMKFRTSYGQNVLRHSIEVSNLAGLMASELGLDVRLAKRAGL
LHDIGKSVDYEVEGSHVSIGVNLCRKYGENATVINAVEAHHGDVDPETAIAVIVQAADTI
SAARPGARRETLETYIKRLQKLEEIATSFKGVEKSYAIQAGREVRIMVTPEEVDDNGLIL
LARDVTKRIENDLEYPGQIKVSIIRETRATEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ataggcttaataataggaattattgtagtcatcattattgttggaataatagcctttttt
agtggcgcttcttatagaaaacacatagcggaagcacaaattggaacagcagaagaaaaa
tcaagaaaaattatagatgacgctatcaaagcaggggaagctaaaaaaagagaagtatta
ttagaagcaaaagaagaaaacattcgtgtcaaaaatgaattagataaagaagtacgcgaa
agaagaaatgaattgcaacaaatggagaaaagattactccataaagaagagaatattgat
agaaaaacagtaacacttgaacaaaaagaagaacaattacaaagaaaaattgataaagct
gataagacgagggaagaagcggaagctttacaccaaaaacagttagaagaacttgaacgt
atttcaggtttgaccttaacagaagcaaaacaatatcttttaagaaccattgaagaagat
gtaagacatgaatctgctataatgattaaagagatagaagcaaaaactaaattggaagca
gataaaaaagcaaaagaaattatcactaatgctatccaaaagtgcgctgtagatcatgta
gtagatacaacggtatctgttgtaccattaccaaatgatgaaatgaagggccgtatcatt
gggcgtgagggaagaaatattagaacattagagacacttactggtatagatctcattata
gatgatacacctgaggcagttatcttatcgggctttgacccaatacgccgtgaagtagcg
cgtattgccttagaaaagttaattgtggatggacgaattcatccagctcgtattgaagaa
atggttgaaaaagctaaaaaagaagtagaagtacttattcgagaagaaggagaagctgct
acttttgaaacgggtgtacatggcttacatccagagcttattcgtttattaggtaaaatg
aaatttagaacaagctacggtcaaaatgtattacgtcattcaatagaggtttctaatttg
gcgggattaatggctagtgagcttggattagatgtacgtttagctaaaagagcaggatta
cttcatgacattggtaaatctgtagattatgaagtagagggttctcatgtaagtataggt
gttaatttatgccgtaagtatggagaaaatgcaactgttattaatgctgtagaagcacat
catggagatgtagatccagaaacagcaattgctgttattgtacaagctgcagacacgatt
tcagcggcaagaccaggggcacgacgtgaaaccttagaaacttatattaaacgtttacag
aaacttgaggaaattgcaacttcctttaaaggtgttgaaaaatcttatgctattcaagca
ggtagagaagtaagaattatggtaacgccagaggaagtagatgataatggtctaatactt
cttgcgagagacgttactaaacgtattgaaaatgatttggaatatccaggtcaaattaaa
gtaagtatcattcgtgaaactcgtgcaactgaatatgctaaatag
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