Caldisericum exile: CSE_01340
Help
Entry
CSE_01340 CDS
T01804
Name
(GenBank) putative ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
cex
Caldisericum exile
Brite
KEGG Orthology (KO) [BR:
cex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cex02000
]
CSE_01340
Transporters [BR:
cex02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CSE_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_15
AAA_23
AAA_22
AAA
AAA_29
nSTAND3
DUF87
AAA_18
AAA_24
AAA_14
AcnX_swivel_put
T2SSE
ATPase_2
NB-ARC
SRP54
Zeta_toxin
NACHT
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAL80260
UniProt:
A0A7U6GDC4
LinkDB
All DBs
Position
116030..117769
Genome browser
AA seq
579 aa
AA seq
DB search
MHDDLKSYLSLLLHYLKGNWISVTFGVILGIVAEICTLISPLITRYLMDFVIIGKNYSYF
KSLILISIFVLMIFLLSSVTGSYVLVKVFKRISANLKLDMFKKLQYAKLSFYEKETSGGI
SYRLLTDTDSLVDSWMGILVTIPMQLILLVSAVFMVKWNLMLALFTFIILGVQSFVIARF
REPILSYTKKVRMKGQEVNGFTVGHFRRIQLVKTISTEELEQKSFFKRLQDLIQLEIKTF
MISKFSSVLQTLISNAWSLTILFYGGMLTIYGKMTIGTLMAFMMFANILYQPIASLTNLI
LSFQSTRVNLMRVKEYLEIEPQISEKPDAIDFTLERGEIKVESVYFSYGDKIVLENVFVD
FPPNSITAIVGPTGSGKTTLAKLLVRFFDPDKGKILLDGIDIRDVKVSSLRKEVKLFLSN
DYVFNGTLYENITYGAKDVTEERIAWALKMASIDFVQKLPYGLNTVIGEGGINLSAGEAQ
RVALARALILSPKVYIFDEPTSSVDLETEDKINEVFLKLKQNSTVIIIAHRLSTARIADK
ILVLENGRINGVGTHIDLLSQNEFYKRVNSILLKESFSG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatttgaaaagttacttatctttgttgttacattaccttaaaggtaattgg
atatctgttacttttggcgttatccttggtattgttgcagaaatatgtaccttaatttct
ccattaattacgagatatttgatggatttcgtaatcattggtaagaattactcatacttt
aaatctctaatccttatttcaatttttgtactgatgatattcttgctttcttcggttaca
ggaagttatgttttagtcaaggtatttaaaagaatctctgcaaaccttaaactcgatatg
ttcaaaaaacttcaatatgcgaaattgagtttttacgagaaagagacaagtggtggcata
agctaccgcttacttaccgatactgattcacttgtagactcctggatgggaattcttgta
acgattccgatgcaactcattcttcttgtaagtgctgtcttcatggttaagtggaatttg
atgcttgctctttttacattcataatccttggagttcaatcttttgtaatagctcgattt
agagagccaatcctgagctatacgaagaaagtaaggatgaaaggacaggaggttaatgga
tttacagtaggtcatttcagaaggattcagctagtaaagactatttcgacggaagaactt
gaacagaaaagtttctttaaaagactacaggatcttattcaattagaaataaaaacattt
atgatttctaaattttccagtgtgttacagactcttataagtaatgcctggtcccttacc
atccttttctatggaggaatgcttacaatttacggaaagatgacaattgggactctaatg
gcatttatgatgtttgctaacattctttatcaaccaattgcaagtcttacaaatcttatc
ctttcatttcaaagcacgagagtcaatctaatgagagtaaaggaatatctcgagattgag
ccacagataagcgaaaagcctgatgcaattgattttactctagaaagaggagaaattaaa
gtagaaagtgtatactttagttacggagataaaattgtattagagaatgtattcgtagat
tttcctcctaactcaataactgcgattgtaggaccaacaggttctgggaaaacaacgctt
gcaaaactgcttgttagattttttgaccctgataaaggtaagattttattagatggtatc
gacataagagatgtaaaagtttcttctcttagaaaagaggtaaaactattcctttctaat
gattatgtttttaacgggactctatatgagaacataacatatggggcaaaggacgttaca
gaagaaaggattgcctgggctttgaaaatggcatcaatcgactttgttcagaagctccct
tatggccttaatacagttattggagagggaggaattaatctttcagcaggagaggcacaa
agggttgctcttgcaagagcattaatactttctccaaaagtctatatatttgacgaaccg
acttcctctgtggacctcgagacagaagataaaataaatgaagttttccttaaactcaag
cagaatagtacagtgattatcatagctcacaggctttctacagcaagaattgcagataaa
atactggtgttagagaacggaagaattaacggagtaggaactcatatagatttgctttca
caaaacgaattctacaaaagagtgaatagtattttactaaaggaaagttttagtggataa
DBGET
integrated database retrieval system
