Caldisericum exile: CSE_02030
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Entry
CSE_02030 CDS
T01804
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cex
Caldisericum exile
Brite
KEGG Orthology (KO) [BR:
cex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cex03032
]
CSE_02030 (hup)
03036 Chromosome and associated proteins [BR:
cex03036
]
CSE_02030 (hup)
03400 DNA repair and recombination proteins [BR:
cex03400
]
CSE_02030 (hup)
DNA replication proteins [BR:
cex03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CSE_02030 (hup)
Chromosome and associated proteins [BR:
cex03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CSE_02030 (hup)
DNA repair and recombination proteins [BR:
cex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CSE_02030 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Arteri_nsp7a
HU-DNA_bdg
HU-CCDC81_euk_1
RNA_polI_A14
Chalcone_3
Tc-38
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
BAL80329
UniProt:
A0A7U6JFD6
LinkDB
All DBs
Position
186864..187139
Genome browser
AA seq
91 aa
AA seq
DB search
MNKPELITAVAEKTGMKKKDVEAMLDAFIDVVKETLKKGDKVALIGFGTWATRERAKRNG
VNPRTGKKISIPAKVVPYFKVGKELKDAVSK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccagaactcattacggcagttgctgagaaaaccggcatgaagaagaaagat
gtcgaagcaatgcttgatgcattcatcgatgtcgtaaaagaaaccctcaagaaaggtgac
aaagtagcacttattggcttcggcacctgggcaacaagggagagagcaaagaggaatggt
gttaaccccagaaccggaaagaagatttctattccagcaaaagtagttccttacttcaaa
gtcggtaaagagttaaaagatgcagtttccaagtag
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