Caldisericum exile: CSE_07310
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Entry
CSE_07310 CDS
T01804
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cex
Caldisericum exile
Pathway
cex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSE_07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cex03019
]
CSE_07310
Messenger RNA biogenesis [BR:
cex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CSE_07310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Cas3_HD
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
BAL80857
UniProt:
A0A7U6JGV0
LinkDB
All DBs
Position
707901..709448
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AA seq
515 aa
AA seq
DB search
MSVPYILYVLVTIFMFAIGAIIGWVVQGYIYKSKIGSFDEYVKKKQEELERKLEVQEREL
KIHSKEELERKIQELESKYKERQRELQEIENRLLKKEEIVDRRAQFLDKKEKDLLKKEED
ILTLNKQIEEKAKSIEAELFKIASLTREEARQIILKEVEESLKKDIARKVSEAEEEIRSI
AKEKAKVILSEAMESCAIDYVAETTVSVVPLPSDELKGRIIGREGRNIRTFETLTGVDLL
IDDTPEAVTLSCFDPIRREIARRALEKLIIDGRIHPARIEEFVSEAEAQFEESLIKDAED
ALMSISLYGFPIELKKIIGEMKYRTSYGQNLLKHSLEVATIAGIIAQEIGENVVLAKRAG
FLHDIGKVISQEYEGPHALTGGELLRKFGENELVIHAVQSHHGDIKQETALDVIVQVADT
LSATRPGARREDLENYIKRMEELERIASSVTGVKKAFVVQAGREVRILVNPEEVDEETSQ
KIARDVARTIEESLVYPGIIKVTVVRETRYVEYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaccgtacattttgtatgtccttgttactatttttatgtttgctattggtgca
ataataggatgggtagttcaaggttatatctataagtctaagataggttcattcgacgag
tatgttaagaagaagcaggaagagttggaaaggaaattagaagttcaggaacgtgaatta
aagattcattcgaaggaagaattagagagaaagatacaggagttagaaagcaaatacaag
gaaagacagagagaacttcaggaaattgagaatagacttttaaaaaaggaagaaattgtt
gatagacgtgcacaatttcttgataaaaaggaaaaagacctcctaaaaaaagaggaagat
attttaactttaaataaacaaatcgaggaaaaagcgaaaagtatcgaagcagagctcttt
aaaattgcatccttaacaagagaggaagcaaggcagatcattctgaaggaggttgaggag
agtttaaagaaagatatagcaagaaaggtttctgaggctgaggaggagataagatcaatt
gcaaaagagaaagcaaaagtaatattatccgaagcaatggaaagttgtgcaattgattat
gttgcagaaaccacagtatcggtagtgccgcttccttctgatgagttaaagggaaggatt
attggtcgtgaaggaagaaacattagaacctttgaaactctaacaggtgttgacctctta
attgatgatacacctgaagcagtaacattgtcttgttttgacccaataagaagggaaatt
gcacgacgagcacttgaaaaattgatcattgatggaagaatacatcctgcaagaattgaa
gaatttgtaagcgaagcagaggcacaattcgaagaaagtctaataaaggatgcagaggat
gccctaatgagtatttcgttgtatggcttcccaattgaattaaagaagataattggtgaa
atgaaatataggacaagttacggtcaaaaccttctaaaacattctcttgaagttgcaaca
attgctggaatcattgctcaagaaattggtgaaaacgttgtacttgcaaaaagggcggga
tttttgcatgacatagggaaagttatttctcaggagtatgaaggccctcatgcgcttact
ggaggggaacttttgagaaaatttggtgaaaacgaattagttattcatgctgttcagtca
caccatggtgatataaaacaagaaactgctctggacgttatagtccaggtggctgatacg
ttatctgcaacaaggcctggtgcaagaagagaagaccttgaaaactacataaagagaatg
gaggaactcgagcgaattgcaagctctgtaactggtgttaaaaaggcgtttgtagtccaa
gcgggacgtgaagttagaattcttgtaaatcctgaggaagttgacgaagaaacttcgcag
aagattgcaagagatgttgcaaggacgattgaagagtctttggtatatccaggcattatt
aaggttactgtcgtaagagaaactcgatatgtagagtatgcaaaatag
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