Caldisericum exile: CSE_10020
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Entry
CSE_10020 CDS
T01804
Symbol
holA
Name
(GenBank) putative DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cex
Caldisericum exile
Pathway
cex03030
DNA replication
cex03430
Mismatch repair
cex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSE_10020 (holA)
03430 Mismatch repair
CSE_10020 (holA)
03440 Homologous recombination
CSE_10020 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cex03032
]
CSE_10020 (holA)
03400 DNA repair and recombination proteins [BR:
cex03400
]
CSE_10020 (holA)
Enzymes [BR:
cex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSE_10020 (holA)
DNA replication proteins [BR:
cex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSE_10020 (holA)
DNA repair and recombination proteins [BR:
cex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSE_10020 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
UvrA_DNA-bind
Symplekin_C
Motif
Other DBs
NCBI-ProteinID:
BAL81128
UniProt:
A0A7U6GEW8
LinkDB
All DBs
Position
978588..979586
Genome browser
AA seq
332 aa
AA seq
DB search
MREISAIELLRELDSELPKEPLVILLGEDHYLKEQIVKKYIDKIFGNNTNNLDYIKLTGA
NLTYQEFVNTISLPPFFSLKLVIIKDGEQISKQNLQKILSAPIPDFSKVILVLNQRDLST
LRGNFIIVKDYTVPLNQVELWIEKKAKEYGKTITKDAIKELIRRLDTNFYALSSEIKKLA
FYVGDKKEIRREIIVELVKELGEEDIFEFVNAIIFLNKDEAVRMLDYFLKDKGQENLVLS
QILKTLSIYLIVNDLKNKEGLNLKSINEYIASLFGTYLRTKTLEEIIKNLERINIDNIVK
QYNVFVEFDIKSKRGEIDLPLTLRNYILTKVS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatttctgcaatagaacttttaagagaacttgatagcgaactcccaaaagag
cctttggtaatacttttaggagaagaccactaccttaaggaacagattgtcaaaaaatat
atagataaaatttttggtaataatacaaacaatcttgattacataaagcttacgggggca
aatttaacataccaagaatttgtaaacacaatttctttgccccccttcttttctttgaaa
cttgtaattataaaagatggggaacaaatctctaaacagaacttgcagaaaattttaagt
gctccaattccagatttttcgaaagtgatacttgttttaaaccaaagagatttaagtacc
cttagagggaactttattattgttaaagattacaccgttcctctcaatcaggtggaactt
tggattgagaagaaggcaaaagagtatggaaagacaatcacaaaagatgcaataaaggaa
ttaattaggagacttgatacaaatttttatgccctttcatctgaaattaaaaaacttgcc
ttctatgtcggagataaaaaggagattagaagagaaataattgttgaacttgtaaaagaa
ttaggtgaagaggatatctttgagtttgttaatgcaataatatttctaaacaaagatgaa
gcagtcagaatgcttgattattttttgaaagacaaaggacaagaaaatcttgtgttatca
caaattttaaaaaccttgtctatatatctaatcgtaaatgacctaaaaaataaggaagga
ttaaacctcaaatctattaatgagtatattgcatcactttttggaacatatcttagaact
aaaacacttgaagaaattataaaaaatcttgaaagaattaacattgataacatagtaaag
caatacaacgtctttgtcgaatttgacataaaatcaaaaaggggggagattgaccttccc
ctgacgctacgaaattatattttaacaaaagtctcttga
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