Caldisericum exile: CSE_12260
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Entry
CSE_12260 CDS
T01804
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cex
Caldisericum exile
Pathway
cex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSE_12260 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cex03019
]
CSE_12260 (groEL)
03110 Chaperones and folding catalysts [BR:
cex03110
]
CSE_12260 (groEL)
03029 Mitochondrial biogenesis [BR:
cex03029
]
CSE_12260 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cex04147
]
CSE_12260 (groEL)
Enzymes [BR:
cex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CSE_12260 (groEL)
Messenger RNA biogenesis [BR:
cex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CSE_12260 (groEL)
Chaperones and folding catalysts [BR:
cex03110
]
Heat shock proteins
HSP60 / Chaperonin
CSE_12260 (groEL)
Mitochondrial biogenesis [BR:
cex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CSE_12260 (groEL)
Exosome [BR:
cex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CSE_12260 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
CSE_12260 (groEL)
Exosomal proteins of breast cancer cells
CSE_12260 (groEL)
Exosomal proteins of colorectal cancer cells
CSE_12260 (groEL)
Exosomal proteins of bladder cancer cells
CSE_12260 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAL81352
UniProt:
A0A7U6JH40
LinkDB
All DBs
Position
1185180..1186793
Genome browser
AA seq
537 aa
AA seq
DB search
MDAKQIIFGMDARKAIQAGVDKLANTVKVTLGPKGRHVALERKFGSPILSDDGVSIAKEI
DLPDPNENIGAQLVKEVASKTEDAAGDGTTTATVLAQVLVDEGIKNVTAGADPLLLKKGI
DRAVEAVIEEMKKFKKDITTKEEIAQVGTVSSKIKEVGEAIADAVDKVGREGVITVEESQ
GIGLEVKTVEGMQFDRGYISPYFVTDTERMEAELKDPFIVITDKKVSSIQEFLPLLERIV
QTGRPFLLIADDVTGEALATLVLNKIKGTFSCVAVKAPGFGDRRKAMLEDIAILTGGQVI
SEDLGIKFESVTLDMLGRADSVKVDKDNTTIIGGKGDKEKIQARIKQIKEEIQRTTSSYD
KEKLQERLAKLSGGVAIIKVGGATETAMKEMKHRVEDAVAATKAALAEGIVAGGGVAFVK
AIPVLDKLEAEGDEKTGIMIVKKALQEPLKLIAENAGYNGIIALNKVMETKDNVGFNAET
GKFEDMFKAGVIDPFKVVRTALQNAASIAGLLLSTEAIVTTIPKEEKQAPAPQYPEY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaagcaaataatttttggaatggatgcaagaaaagcaatacaggcaggcgtt
gataaattagcaaacactgttaaagtaacattaggtccaaaaggaagacacgttgcactt
gaaaggaaatttggatcacctattctttctgacgacggtgtttcaattgcaaaggaaatt
gatttaccagatccaaatgaaaatattggcgctcagttagtaaaagaagttgcatccaaa
acagaggatgcagcaggtgatggcaccacaacagcaacagtcttagcacaggttctcgtt
gatgaagggattaagaatgttaccgctggcgcagatccattacttctaaagaaaggcatc
gatagagcagttgaagcagtaatcgaagaaatgaagaagttcaaaaaagatataaccaca
aaagaagaaattgcacaagttggaaccgtctcttcaaagattaaagaggtcggagaagca
atcgcagatgcagttgataaagttggaagagagggtgttattaccgttgaagaatcccaa
ggtatcggtttggaagtaaagactgtcgaaggaatgcagtttgatagaggatatatctca
ccttactttgtaaccgacactgaaagaatggaggcagaacttaaagatccattcatcgta
attactgataaaaaggtttcatctattcaagaattcttgcctcttcttgaaagaattgtc
caaacaggaaggccattccttctcatcgcagatgatgtaacaggtgaagcacttgcaaca
ttggttcttaataagatcaaaggaacattctcatgtgtagcagttaaggcacctggcttt
ggcgatagaagaaaagcaatgcttgaagatattgcaattcttacaggcggacaggttatc
tctgaagacctcggtatcaaatttgaaagtgtcacccttgatatgctcggaagagcagat
tcagtaaaggttgataaagataatacaacaatcattggcggtaagggagacaaagaaaaa
atccaagcaagaattaaacaaattaaagaagaaattcagagaacaacttcaagttacgat
aaggaaaaacttcaggagcgtcttgcaaaactctcaggtggagttgcaatcatcaaagtt
ggcggtgcaactgagactgcaatgaaagaaatgaaacacagagttgaagacgcagttgca
gcaacaaaagcagcgcttgcagaaggtattgttgcaggtggtggagttgcatttgttaag
gcaattcctgttcttgataaattagaagcagaaggcgatgaaaagactggcattatgatt
gtcaagaaggcacttcaagagcccctcaaacttattgcagaaaatgcaggatacaacgga
attatcgctcttaacaaagtaatggaaacaaaagataacgttggtttcaacgcggaaaca
ggtaaatttgaggatatgtttaaggctggtgttattgatccatttaaggtagtaagaaca
gcgcttcagaacgcagcaagcattgcaggactgttgctttctactgaggcaattgtaaca
actattccgaaagaggagaaacaagcgccagcacctcaatatcctgaatactaa
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