Corallococcus exiguus: ACN6A2_07130
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Entry
ACN6A2_07130 CDS
T11255
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cexi Corallococcus exiguus
Pathway
cexi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cexi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6A2_07130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cexi03019
]
ACN6A2_07130
03400 DNA repair and recombination proteins [BR:
cexi03400
]
ACN6A2_07130
Enzymes [BR:
cexi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACN6A2_07130
Messenger RNA biogenesis [BR:
cexi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACN6A2_07130
DNA repair and recombination proteins [BR:
cexi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACN6A2_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_Crp_2
ResIII
DUF4423
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XWU95077
LinkDB
All DBs
Position
1826942..1828999
Genome browser
AA seq
685 aa
AA seq
DB search
MMNMRAMTESLPFLEDAQQGLVRHFGLPEFRPGQAPVISSVLSGRNTVVVMPTGAGKSLC
YQLPAMLLPGITLVVSPLIALMKDQVEQLTAKGIAATYINSSLSDVERAERLRKLRAREY
KLLYVAPERFRSASFLELVSGLGVELLAVDEAHCISQWGHDFRPDYALLGQVRKRLRPPR
TVALTATATPEVREDIVRVLLMKDPAVFAQGFDRPNLFLDVVNVSGDEERRDACASLAAK
GGGSGIIYCSTRKAAEGMHSALVTRKVKAVLYHAGMEDDARRRAQDDFMSAKEAVAVATN
AFGMGIDKSDIRFVAHANIPRAVEAYYQEIGRAGRDGNPATAVLLFNHADVYTQERLIEG
SHPSESVLADIWAQLQAVEEFDRGVHALAGMVGASEFEVSAALKIFEREGKLERGGRGEG
EYGITLTDKAASAQPHAAESQRLLRSLLETFPVGRQATTELPILARRTGLTEDDVRHALG
LLEKSGVVRVRRPFAGRSIRALERVPFRELTVDLSRVREQERLNRLMLKRMADYAYTPKC
RRAFILRYFGQTDAAAVCGKCDRCAGSMMPKPSGSSSRSLPAVAGAPVMAYSELASMELR
RWRKDLAKDLGVAPFIIFNDATLLGLSAALPVDREAFLAVKGTGESRWERFGPKVVEICL
MARAAGHEPQAAPVAPRIRKAKSRS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacatgcgcgcgatgacggagtccctgcccttcctcgaagatgcccagcaggga
ctggtgcggcacttcggcctgccggagttccgccctggccaggcacccgtcatcagctcc
gtcctcagcggccgcaacaccgtggtggtgatgcccacgggcgcgggcaagagcctgtgc
taccagctgccggcgatgctgttgccgggcatcacgctggtggtgtcaccgctcatcgcg
ctgatgaaggaccaggtggagcagctcaccgcgaagggcatcgcggccacgtacatcaac
tcgtccctgtccgacgtggagcgggcggagcgcctgcgcaagctgcgcgcccgcgagtac
aagctgctctacgtggcgccggagcgcttccgcagcgcaagcttcctggagctggtgtcc
gggctgggcgtggagctgctcgccgtggacgaggcgcactgcatctcccaatggggccac
gacttccggccggactacgcgctcttgggccaggtgcgcaagcggctgcggccccctcgc
acggtggcgctcaccgccacggcgacgccggaggtgcgcgaggacatcgtccgcgtgctc
ctgatgaaggacccggcggtgttcgcgcaggggttcgaccggcccaacctcttcctggac
gtggtgaacgtcagcggggacgaagagcgccgggacgcgtgcgcgagcctggcggcgaag
ggcggcggcagcggcatcatctactgctccacgcgcaaggcggcggaagggatgcactcc
gcgctcgtcacgcgcaaggtgaaggcggtgctgtaccacgcgggcatggaggacgacgcc
cgccgccgcgcgcaggacgacttcatgtccgcgaaggaggcggtggcggtggccaccaac
gccttcggcatgggcatcgacaagtcggacatccgcttcgtcgcgcacgccaacatcccc
cgcgcggtggaggcgtactaccaggagattggccgcgcgggccgcgacggcaaccccgcc
acggcggtgctcctgttcaaccacgcggacgtgtacacgcaggagcgcctcatcgagggc
agccacccgtccgagtccgtgctggcggacatctgggcgcagctgcaggccgtggaggag
ttcgaccggggcgtgcacgcgctcgcgggcatggtgggcgccagcgagttcgaggtctcc
gccgccctgaaaatcttcgagcgcgaaggcaagctggagcgcggtggccggggtgaaggc
gagtacggcatcacgctgacggacaaggccgccagcgcgcagccgcacgcggcggagtca
cagcggctgctgcgttcgctgctggagaccttccccgtggggcggcaggcgaccacggag
ttgcccatcctcgcgcggcgcacggggctgacggaggacgacgtccggcacgcgctgggc
ctcctggagaagtcgggcgtggtgcgggtgcgccggccgttcgcggggcgctccatccgc
gcgctggagcgcgtcccattccgcgagctgacggtggacctgtcccgggtgcgcgagcag
gagcggctcaaccggctgatgctcaagcggatggcggactatgcgtacacgccgaagtgc
cggcgcgcgttcatcctgcgctacttcgggcagacggacgcggcggcggtgtgcggcaag
tgcgaccggtgcgcgggcagcatgatgcccaagccgtccggctcctcctcgcgctccctg
cccgccgtggccggagcgccggtgatggcgtacagcgagctggcgtccatggagctgcgc
cgctggcgcaaggacctggcgaaggacctgggcgtcgcgcccttcatcatcttcaacgac
gcgacgctgctggggctgtccgccgcgctgccggtggaccgggaggccttcctcgcggtg
aagggcaccggggagagccgctgggagcgcttcggccccaaggtggtggagatctgcctg
atggcgcgcgcggcgggccatgagccgcaggcggcgcccgtggccccgcgcatccgcaag
gcgaagtcgcgcagctaa
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