Coxiella mudrowiae: CleRT_02740
Help
Entry
CleRT_02740 CDS
T03998
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cey
Coxiella mudrowiae
Brite
KEGG Orthology (KO) [BR:
cey00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CleRT_02740 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cey03021
]
CleRT_02740 (rpoD)
Transcription machinery [BR:
cey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CleRT_02740 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
TCTP
Motif
Other DBs
NCBI-ProteinID:
AKQ33267
UniProt:
A0ABM5UTM1
LinkDB
All DBs
Position
complement(291334..293451)
Genome browser
AA seq
705 aa
AA seq
DB search
MPTRKKKSNTLKENKKISVKKVKTNKTKAKAPVKPKSKPAVKHPMAKKSKPYRGGEGIKR
AQKIPVYKKIGEEALKKTSPPQKAKETAVPAFSAPAKLEENIIESQRLGFSTLLEEAKNK
GYLVHEDLINLLPNDYADPTQMEGIIGRLTEMGIKVFEIPPDADSLLLEEDTQSDDDEIK
DDVAEVLATETRTTDPVRMYMREMGSVELLTREGEIVIAKRIEEGIRQVMGAVVQYPELI
ESFIKEYETTVATESRLSDLLIGFFDEERGLPPEAAKEVEITEDQKEEGGEEGADEFGES
GPDPVITQKNMEELKALYGRYLNAIKRYGKKTPATLKHQRNLAEFFSTFKLSIRQFNRLT
GRLLRLLKEARSHDRLIMAYCVVKAKTPRKKFIASFPHNETNMNWLEQYKKENKEQAKRL
ELYSKEIYRAQRNLIQLEEKSNLTIQEIKEINRRVAIGEAKSRRAKKEMIEANLRLVISI
AKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
RIPVHMIETINKLNRISRQILQETGMEATPEELGRRMDMSEEKVRKVLKIAKEPISMETP
IGEDEDSNLGDFIEDVNMESPIDFATSAGLVEATREILATLTPREAKVLRMRFGIDMNTD
HTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRAEKLHSFLETEE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcgtaagaaaaaatccaatactttaaaagaaaataaaaaaataagtgtaaaa
aaagtaaagaccaataaaaccaaggctaaagctccagtaaaacccaaatcaaaacctgcg
gttaaacaccccatggcaaagaaatctaagccatatagaggtggggaggggataaaaaga
gctcagaaaatccctgtgtataaaaagattggagaagaagctcttaaaaaaacaagccct
ccgcagaaggctaaagaaacagcggttcctgcattctctgcccctgctaaattagaagaa
aatattattgaaagccaacggttaggttttagtaccttattagaagaggctaaaaataag
ggatacttggttcatgaagatctcattaaccttctcccgaacgattatgccgaccccaca
caaatggaaggtatcatcggtcgtctcactgagatggggattaaggtattcgagattccc
cctgatgcggattccttgcttttggaagaagacacccaatcagatgatgacgaaattaaa
gatgacgtagcagaagtgttagcgacggaaacgcgaactacagatcctgttcgtatgtat
atgagggagatgggtagcgtcgaattattaacacgtgaaggtgagattgtcattgccaag
cgaattgaagaggggattcgtcaagtaatgggagctgtggtccaatacccggaactaatt
gaatcctttattaaagaatatgaaaccacagtagctactgagagccgattaagcgattta
cttatcggattttttgacgaagaaagagggctgcctccggaagctgctaaagaagtcgaa
ataactgaggaccaaaaagaggaaggcggcgaagagggcgcggatgaatttggtgaaagt
ggccccgatccagtgataacgcaaaaaaatatggaggagcttaaagctctctatggtcgt
tatttaaatgcaattaaacgctacggcaagaaaacaccggctactttaaaacatcaaaga
aacttagcggaattcttttctacctttaaactctctatccgccaattcaatcgactcaca
ggacgattacttcgtctcttaaaagaggcgcgtagtcatgaccggttaattatggcttat
tgtgtggtaaaagcaaaaacaccgcgtaaaaaattcattgcatccttccctcacaatgaa
accaatatgaattggttggagcaatataaaaaagaaaataaggaacaggcaaaacgattg
gaactttatagtaaagagatttatcgcgctcaacgaaatctcatacaattagaagaaaaa
agcaatttaactattcaggaaattaaagaaattaatcgtcgagttgctattggcgaagcc
aaatcacgccgtgccaaaaaggaaatgatcgaagctaacttacgtctggtaatttccata
gcaaaaaaatacactaatcgcggcttacaatttcttgatctcatccaggaaggtaatatc
ggtttgatgaaagccgtggataaatttgaataccgccgcggctataaattttcaacctat
gctacttggtggatccgtcaagcaattactcgttctattgccgatcaggcgcgcactatt
cgcatccctgtgcacatgattgaaaccatcaataaacttaatcgaattagccggcaaatt
ttacaagaaaccggtatggaagctacccccgaagaattggggcgccgcatggatatgtcc
gaagaaaaagtgagaaaagtactgaaaattgctaaagaacccatttctatggaaacacca
attggtgaagatgaggattctaatctcggagactttattgaagatgtgaatatggaatcg
cctattgattttgcaacttcagccggtttggtagaggcaacccgtgaaattttagccacc
cttacgccccgtgaagccaaggttttacggatgcgttttggaattgatatgaataccgat
catactctggaagaagtgggtaagcagttcgatgtaacacgggaacggatacgacaaatt
gaagctaaagcgttacgtaaattgcgtcatcccagtcgcgccgaaaaattacatagtttt
cttgaaaccgaagaataa
DBGET
integrated database retrieval system
