Cellulomonas sp. PSBB021: CBP52_02880
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Entry
CBP52_02880 CDS
T04985
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cez
Cellulomonas sp. PSBB021
Pathway
cez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBP52_02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cez03400
]
CBP52_02880
Enzymes [BR:
cez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CBP52_02880
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CBP52_02880
DNA repair and recombination proteins [BR:
cez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBP52_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ASR54263
UniProt:
A0A222X8B3
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All DBs
Position
complement(632934..633824)
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AA seq
296 aa
AA seq
DB search
MPELPEVEALAAFLRERAVGRTVTQIGVGDIAALKTFRPPPDALVGGTVVDAGRHGKWLD
LLVATSTGEPLHLVWHLSRAGWVRWSEKLATTPVRPGRSPLALRVRLDDGSGFDLTEQGT
RRRLAVHVVEDPADVPQIASLGVEPLSPEFTRERFGALLAARNQQVKGLLRDQGTIAGIG
NAYSDEILHAARTSPFALTGKLSDEQADVIYAAVREVLAQAVAEASGKPAAELKDAKRRG
MRVHGRTGEACPGWDGVPCGDTVHEVSFADSSLQYCPTCQTGGKPLADRRMSRLLR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtcgaggcgctcgccgcgttcctgcgcgagcgcgccgtcggc
cgcaccgtgacgcagatcggcgtcggcgacatcgccgcgctcaagacgttccgcccgccg
cccgacgcgctcgtcggcgggacggtcgtcgacgcgggccggcacggcaagtggctggac
ctgctcgtcgcgacctcgaccggcgagccgctgcacctggtgtggcacctgtcgcgcgcg
gggtgggtgcgctggtcggagaagctcgcgacgacgcccgtgcggccgggccgctcgccg
ctcgcgctgcgcgtgcgcctcgacgacggctcggggttcgacctgaccgagcagggcacg
cgcagacggctcgcggtgcacgtggtcgaggaccccgccgacgtgccgcagatcgcgtcg
ctgggcgtcgagccgctctcgccggagttcacgcgcgaacggttcggcgcgctgctcgcc
gcgcgcaaccagcaggtcaagggcctcctgcgcgaccagggcacgatcgcgggcatcggc
aacgcgtactccgacgagatcctgcacgcggcgcgcacgtcaccgttcgcgctcaccggc
aagctgtccgacgagcaggccgacgtgatctacgcggccgtgcgggaggtgctcgcgcag
gccgtcgccgaggcctcgggcaagcccgcggccgagctcaaggacgccaaacgacgcggc
atgcgtgtgcacggacgcacgggcgaggcgtgcccgggctgggacggtgtgccgtgcggt
gacaccgtgcacgaggtgtcgttcgccgactcgtcactgcagtactgcccgacgtgccag
accggcggcaagccgctggccgaccggcgcatgtcccggctgctgcgctga
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