Cellulomonas sp. PSBB021: CBP52_04705
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Entry
CBP52_04705 CDS
T04985
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cez
Cellulomonas sp. PSBB021
Pathway
cez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP52_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cez03019
]
CBP52_04705
03009 Ribosome biogenesis [BR:
cez03009
]
CBP52_04705
Enzymes [BR:
cez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBP52_04705
Messenger RNA biogenesis [BR:
cez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBP52_04705
Ribosome biogenesis [BR:
cez03009
]
Prokaryotic type
rRNA helicases
CBP52_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASR54544
UniProt:
A0A222X946
LinkDB
All DBs
Position
1043248..1045101
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AA seq
617 aa
AA seq
DB search
MSLPSGTRAPSHVLTDPSTDAGTPVPAGPDSPVAPSGPTFDDLGLPAALHRAVTDLGFTT
PSAIQQRAVPALLGGRDLLGVAQTGTGKTAAFGLPLLAAVDPALRAVQAVVLAPTRELAM
QVADAISSFAKHLPGVDVVPVYGGSPYLPQQRALQRGAQVVVGTPGRVIDHLERGSLVLD
QVRFLVLDEADEMLRMGFAEDVDKVLSRAPRQRQVALFSATMPTPIRRVAEQHMVDPVEV
TVARQSSTVTSVRQTYAVVPFRHKAGALARVLAVTDADAAIVFVRTRGNAEELGSALVER
GVSAAYISGDVAQGEREKIVERLRSGALDVLVATDVAARGLDVERIGLVVNFDVPREPET
YVHRIGRTGRAGRDGTALTFVTPAEQSRLRTIERTTRTSLEQVTIPSPAEVSAHRVRTLL
ERVPQRTSAGRLDVYRAAVADLVREDPGADLADLLATVLALAVGDEGPGAADDLDDALAR
AAAAPSHDRVGASRDGAPPRERRRTSTHIAGGPPRWRVAVGHRDGLQPGALVGALTGEGG
LTGADVGKIDIFPSFALVDIPGGLSAEAVDRLSRTRVAGRPLRIRVDSGPRGSHGDSGPR
GGHGASRAGHAPSRARS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccctcgggcacccgtgcgccttcgcacgtcctcaccgacccctcgaccgac
gcgggcacccccgtgcctgccggtcccgactcccccgtcgccccgtcggggcccacgttc
gacgacctcggcctgcccgccgcgctgcaccgcgcggtgacggacctcggcttcaccacc
ccgtcggccatccagcagcgcgcggtcccggccctgctcggcgggcgtgacctgctcggc
gtcgcgcagaccggcaccggcaagaccgccgcgttcggcctgcccctgctcgccgcggtc
gaccccgcgctgcgcgccgtgcaggccgtcgtcctcgccccgacgcgcgagctcgcgatg
caggtcgccgacgcgatctcgtcgttcgcgaagcacctgcccggcgtcgacgtcgtcccc
gtgtacggcggctcgccgtacctgccgcagcagcgtgcgctgcagcgcggtgcccaggtc
gtcgtcggcacgcccgggcgtgtgatcgaccacctcgagcgcgggtcgctcgtgctcgac
caggtgcggttcctggtcctcgacgaggccgacgagatgctgcgcatgggcttcgcggag
gacgtcgacaaggtcctgtcgcgagcaccgcggcagcgtcaggtcgcgctgttctccgcg
acgatgccgacgccgatccgacgtgtcgccgagcagcacatggtcgacccggtcgaggtc
acggtcgcccgccagtcctcgaccgtgacgagcgtgcgccagacctacgcggtcgtcccg
ttccggcacaaggccggcgcgctcgcgcgcgtcctcgcggtcaccgacgcggacgccgcg
atcgtgttcgtccgcacgcggggcaacgccgaggagctgggttccgcgctcgtggagcgc
ggggtgtccgcggcgtacatctcgggcgacgtggcccagggcgagcgcgagaagatcgtc
gagcggttgcgcagcggcgcgctcgacgtgctggtcgccacggacgtcgcggcgcgcggg
ctcgacgtcgagcgcatcggcctcgtcgtcaacttcgacgtgccgcgcgagccggagacg
tacgtgcaccgcatcggtcgcaccggccgtgcgggccgcgacggcaccgcgctcacgttc
gtcacacccgccgagcagtcgcgactgcgcaccatcgagcgcaccacgcgcacgtcgctc
gagcaggtcaccatcccgtcgcccgccgaggtcagcgcgcaccgcgtgcgcacgctgctg
gagcgcgtgccgcagcgcacgtccgccggtcgcctggacgtgtaccgcgcggccgtcgcg
gacctcgtgcgcgaggacccgggcgccgacctggccgacctgctcgccaccgtgctcgcg
ctcgccgtcggcgacgagggccccggcgctgccgacgacctcgacgacgcgctcgcgcgt
gccgcggccgccccgtcgcacgaccgggtcggcgcgtcccgcgacggagccccgccgcgc
gagcgtcgccgcacgagcacccacatcgccggcggtccgccgcggtggcgcgtcgccgtc
gggcaccgcgacggcctccagccgggcgcgctcgtcggcgcgctcacgggcgagggcggc
ctcacgggcgcggacgtgggcaagatcgacatcttcccgagcttcgcgctggtggacatc
cccggcggcctgtccgccgaggccgtcgaccggctgtcccgcacgcgcgtcgccggacgc
ccgctgcggatccgggtggactcgggcccgcgtggcagccacggcgactccgggccgcgc
ggcggtcacggtgcgagccgcgccgggcacgccccgtcgcgcgcgcgctcctga
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