KEGG   Cellulomonas sp. PSBB021: CBP52_04760
Entry
CBP52_04760       CDS       T04985                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cez  Cellulomonas sp. PSBB021
Pathway
cez03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CBP52_04760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cez03400]
    CBP52_04760
Enzymes [BR:cez01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CBP52_04760
DNA repair and recombination proteins [BR:cez03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CBP52_04760
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: ASR54550
UniProt: A0A222X6U0
LinkDB
Position
1058767..1059672
AA seq 301 aa
MTPERQTFDVGGTQVRVSHLDKVLYPSTGTTKAELIDYVVRVAPALLRQLEDRPVTRIRF
PDGVDGQPFFEKNVPRGAPPWLRHRVLPAAPGNDDEGTELDLPFLDDLAGLVWATNAGAL
ELHTPQWSVTRGGKVRGADRLVVDLDPGEGAGLDECTQVAHLVAQRLAKDDLTTTVPVTS
GSKGMQLYAPLPRRRPAVQVRQYARDLAHELAREHPQLVVAVMRKDLRGGKVLLDWSQNH
PAKTTITPYSLRGRHEPRVAAPRWWDEVVPGLTQLAPTDVAQRLAERGDPFVDGAGRPSP
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccccgagcgccagacgttcgacgtgggcggcacgcaggtgcgcgtctcgcacctg
gacaaggtgctgtacccgtcgacgggcacgaccaaggccgagctgatcgactacgtcgtg
cgggtcgctcccgcgctgctgcgccagctcgaggaccggcccgtcacgcgcatccggttc
ccggacggggtcgacgggcagccgttcttcgagaagaacgtgccgcgcggcgcgccgccg
tggctgcgccaccgcgtgctgccggccgcgccgggcaacgacgacgagggcaccgagctc
gacctgccgttcctcgacgacctcgcggggctggtgtgggcgaccaacgcgggcgcgctc
gagctgcacaccccgcagtggtcggtcacccgcggcgggaaggtgcgcggtgcggaccgg
ctcgtcgtcgacctcgaccccggcgagggcgcggggctcgacgagtgcacgcaggtggcg
cacctcgtcgcgcagcgactcgccaaggacgacctgacgacgaccgtgcccgtcacctcg
ggcagcaagggcatgcagctgtacgcgccgttgccccggcgccgccccgcggtccaggtg
cgccagtacgcgcgggacctggcgcacgagctcgcgcgcgagcacccgcagctcgtcgtg
gccgtcatgcgcaaggacctgcgcggcggcaaggtcctgctcgactggtcccagaaccac
cccgcgaagacgaccatcacgccgtactcgctgcgcggccggcacgagccgcgcgtcgcc
gcgccccgctggtgggacgaggtggtcccggggctcacccagctcgctcccaccgacgtc
gcgcagcggctcgcggagcgcggcgacccgttcgtggacggtgcgggacggccgtcgccg
ccctga

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