Cellulomonas sp. PSBB021: CBP52_09610
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Entry
CBP52_09610 CDS
T04985
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cez
Cellulomonas sp. PSBB021
Pathway
cez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBP52_09610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cez03021
]
CBP52_09610
03400 DNA repair and recombination proteins [BR:
cez03400
]
CBP52_09610
Enzymes [BR:
cez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBP52_09610
Transcription machinery [BR:
cez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBP52_09610
DNA repair and recombination proteins [BR:
cez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBP52_09610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
ASR55304
LinkDB
All DBs
Position
complement(2109044..2112913)
Genome browser
AA seq
1289 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
NCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEEGRHEDLPNLQNEIDLERKEIADRRDNDINNRAAKLEAD
LAELEAEGAKADARRKVRDSAEREMAQIRKRADAEIERLEQVWDRFKNLKVADLEGDEML
YRQLQDRYGNYFEGSMGAAAIQKRLEAFDLEAESENLREIIKTGKGQRKTRALKRLKVVN
AFLTTNNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDKPGAEGEGR
AFSSVAEAVMAFDQGTLDLNAVVKIRFDDLVLPEEDAPEGYEYGQTLLFETTLGRALFNE
LLPVDYPYENGVVDKKRLSVIVNDLAERYPKVAVAASLDALKEAGFRWATRSGVTIAISD
VATPAAKAAILEEHEARAAKVQGQYEKGLITDDERRQELIEIWTQATDKVAKSMQENFPA
RNTVFRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLTMPIGVPGADGKLRRHDK
VETSVFSRTLATDIEVEGEVIGRAGDDVGDVLLDRLLETGVDTLKVRSVLTCESRVGTCA
KCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRVQEL
FEARTPKGEAPIAEFSGRVAIEEGDRSRRIVLTPDDGSEEIAYPITKRSRLLVNDGDHVA
VGTQLVQGAVDPKKVLRILGPRKTQEHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRRVT
VLDSGTTDLLPGELAERGKFEDANRRTVAEGGQPASGRPELMGITKASLATDSWLSAASF
QETTRVLTEAAMSGRSDPLLGLKENVILGKLIPAGTGLPRYRDIAVEPTEEAKAELYPTF
GYDEIDFPALGFGSGEAIPLEDIDFGDLR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgtatcggcctggccacggccgacgacatc
cgtgcctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccggaccctgaag
ccggagaaggacggtctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
aactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgttccaaggtgcgccgtgagcgcatgggccacatcgagctggccgccccc
gtcacgcacatctggttcttcaagggtgtgccgtcgcgtctgggctacctgctcgacctg
gcgcccaaggacctcgagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gaggagggccgtcacgaggacctcccgaacctccagaacgagatcgacctggagcgcaag
gagatcgcggaccgccgcgacaacgacatcaacaaccgtgccgccaagctcgaggccgac
ctggccgagctcgaggcggagggtgccaaggccgacgcgcggcgcaaggtgcgcgactcg
gccgagcgggagatggcgcagatccgcaagcgtgcggacgcggagatcgagcgcctcgag
caggtctgggaccggttcaagaacctcaaggtcgcggacctcgagggcgacgagatgctc
taccgccagctccaggaccgctacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgcctcgaggcgttcgacctggaggcggagtcggagaacctgcgcgagatc
atcaagaccggcaagggccagcgcaagacgcgcgccctcaagcgtctgaaggtcgtcaac
gcgttcctcacgacgaacaactcgccgacgggcatggtcctcgatgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctcgacggtggccggttcgccacctcggacctg
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctcctggacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgccgaagcagatggcgctcgagctgttcaagccgttcgtcatgaagcgcctg
gtggacctcaaccacgcgcagaacatcaagtccgccaagcgcatggtcgagcgcgcccgc
ccggtcgtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctggtcgagggcaag
gcgatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgcccctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggtcgtccggtgaccatgccctcgcaggac
atgatcatcggcctgtaccacctgacgtccgacaagccgggcgccgagggcgagggccgt
gcgttcagctcggtcgccgaggccgtcatggcgttcgaccagggcacgctcgacctcaac
gcggtcgtgaagatccggttcgacgacctggtgctgcccgaggaggacgcgcccgagggc
tacgagtacggccagaccctgctgttcgagacgacgctgggccgcgcgctgttcaacgag
ctgctcccggtcgactacccgtacgagaacggcgtcgtcgacaagaagcggctgtccgtg
atcgtgaacgacctcgcggagcgctaccccaaggtggccgtcgcggcgtcgctcgacgcc
ctgaaggaggccggcttccgctgggccacccgctcgggcgtgacgatcgcgatctccgac
gtcgccacgccggcggcgaaggcggcgatcctcgaggagcacgaggcgcgcgcggcgaag
gtgcagggtcagtacgagaagggcctcatcaccgacgacgagcgtcgtcaggagctcatc
gagatctggacgcaggccaccgacaaggtcgccaagtcgatgcaggagaacttccctgcg
cgcaacacggtgttccggatggtcggctcgggcgcacgtggtaactggatgcaggtccgt
cagatcgccggtatgcgcggtctcgtggcgaacccgaagggcgagatcatcccgcgcccg
atcaagtccaactaccgcgagggcctgtccgtcctcgagtacttcatcgcgacgcacggt
gcccgcaagggtctggcggacaccgctctgcggaccgccgactcgggttacctcacgcgt
cgtctggtggacgtctcgcaggacgtcatcgtgcgcgaggacgactgcggcaccgagcgc
ggtctgaccatgccgatcggtgtcccgggtgcggacggcaagctgcgccgccacgacaag
gtggagacgagcgtcttctcgcgcacgctggccaccgacatcgaggtggagggcgaggtc
atcggccgcgcgggcgacgacgtgggcgacgtcctgctggaccgcctgctcgagacgggc
gtcgacaccctcaaggtgcggtcggtgctcacgtgcgagtcgcgtgtcggcacgtgcgcg
aagtgctacggccgctcgctggccaccggcaagctcgtcgacatcggtgaggccgtcggc
atcatcgcggcgcagtcgatcggtgagcccggcacgcagctgacgatgcgtaccttccac
accggtggtgtcgcctccgcggaggacatcacgcagggtctgccgcgtgtccaggagctc
ttcgaggcccgcacccccaagggtgaggcgccgatcgcggagttctcgggccgggtggcg
atcgaggagggtgaccgctcgcggcgcatcgtcctgacgccggacgacggctcggaggag
atcgcgtacccgatcaccaagcgctcgcgtctgctcgtgaacgacggcgaccacgtcgcg
gtcggcacgcagctggtgcagggtgccgtggacccgaagaaggtcctgcgcatcctgggc
ccgcgcaagacgcaggagcacctggtcgacgaggtgcaggaggtctaccgctcgcagggc
gtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgtcgcgtgacg
gtgctcgactccggcacgaccgacctgctgcccggcgagctcgccgagcgcgggaagttc
gaggacgcgaaccgcaggacggtcgccgagggcggtcagccggcctcgggtcgtccggag
ctcatgggcatcacgaaggcgtcgctcgcgacggactcgtggctgtcggcggcctccttc
caggagacgacccgcgtgctcaccgaggccgcgatgtcgggtcggtccgacccgctgctc
ggcctcaaggagaacgtcatcctcggcaagctcatccccgccggtaccggcctgccgcgt
taccgcgacatcgccgtggagccgaccgaggaggccaaggccgagctgtacccgacgttc
ggctacgacgagatcgacttccccgccctgggcttcggctcgggtgaggcgatcccgctc
gaggacatcgacttcggcgacctgcgctga
DBGET
integrated database retrieval system
