Canis lupus familiaris (dog): 100685748
Help
Entry
100685748 CDS
T01007
Symbol
BOP1
Name
(RefSeq) ribosome biogenesis protein BOP1 isoform X4
KO
K14824
ribosome biogenesis protein ERB1
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfa03009
]
100685748 (BOP1)
Ribosome biogenesis [BR:
cfa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100685748 (BOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
NBCH_WD40
EIF3I
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
MIOS_WD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100685748
NCBI-ProteinID:
XP_038283381
Ensembl:
ENSCAFG00000001554
VGNC:
38498
LinkDB
All DBs
Position
13:complement(37662427..37688100)
Genome browser
AA seq
792 aa
AA seq
DB search
MREVKRSFQGQAAVLPVEADGQWGRLHPGAGGRGLRPEDCGLGGWPHRALGQQGACWVAG
GLGVWLSSLLCSLQSSLAGAPAPSLQEGSDSGLSESEESVFSGLEDSGSDSSEDDPAEEE
EEVSSDEGHGGPEKTAGQQAATPSPSTEVARAQGCEEYAVDSSDEEDIRNTVGNVPLEWY
DNFPHVGYDLDGRRIYKPLRTRDELDQFLDKMDNPDYWRTVQDRMTGHDVRLTDEQVALV
RRLQRGQFGDVSFDPYEPAVDFFSGDLMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIK
MGWIQPRRPREHSPSFYDLWAQEDPDAVLGRHKMHVPAPKLALPGHAESYNPPPEYLPSE
EERLAWEQQEPGERKLNFLPRKFPSLRAVPAYGRFIQERFERCLDLYLCPRQRKMRVNVD
PEDLIPKLPQPRDLQPFPTCQALVYKGHSDLIRCLSVSPEGQWLASGSDDGSVRLWEVAT
ARCMRTVPVGGRGRVSARRRGRRGSGHRPEPDSPPLTPVCREDSVLLLNPALGDRLAVGG
TDQLLSAFVAPEEPAEQPARWLEASEEERREGLRLRICHGKPVTQVIWHGRGDYMAVVLA
AAGHTQVLIHQLSRRRSQSPFRRSHGQVQRVAFHPVRPFLLVASQRSVRVYHLLRQELTK
KLRPNCKWVSSLAVHPAGDNIICGSYDSKLVWFDLDLSCEPYRVLRHHRKALRAVAFHTR
YPLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLRGHTLTRDLGVLDVAFHPTQPWIF
SSGADGTVRLFT
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaagttaaacgttccttccaagggcaggcggccgtgctgccagtggaggcggac
gggcagtggggaaggctccacccgggtgctggaggtagaggcttgcgacctgaggactgt
ggccttggaggctggccacacagagccttgggtcagcagggtgcctgctgggtggcaggc
ggcctgggggtctggctgtcatcactactgtgctccttgcagtcctctctcgccggtgcc
cctgctcccagcctccaggagggcagcgattctggcctgtctgaaagcgaagagagtgtg
ttctcaggcctggaagattccggcagcgacagtagtgaggatgacccggccgaggaagag
gaggaggtcagcagtgatgagggccacggtgggccggagaagaccgctgggcagcaggct
gcgaccccgagccccagcacagaggtggcgagagcgcagggctgtgaagagtatgcggtg
gacagctctgacgaggaggacatccggaacacggtgggcaatgtgcccctggagtggtac
gacaacttcccccacgtgggctatgacctggacggcaggcgcatctacaagcccctgcgc
acccgtgacgagctggaccagtttctggacaaaatggacaaccctgattactggcgcacg
gtgcaagaccggatgacggggcatgacgtgcggctgactgatgagcaggtggccctggtt
cggcggctgcagaggggccagtttggggacgtgagcttcgatccctacgagccggctgtg
gacttcttcagtggggacctgatgatccacccggtgaccaaccgacctgctgacaagcgc
agcttcatcccgtccctggtggagaaggagaaggtctcccgcatggtgcacgccatcaag
atgggctggatccagcctcgccggccgcgggagcacagccccagcttctacgacctctgg
gcgcaggaggaccctgacgcagtgctgggccgacacaagatgcacgtgcccgcccccaag
ctggccctgcccggccacgcggagtcctacaacccgcctcccgagtacctgcccagcgag
gaggagcgcctggcgtgggagcagcaggagccgggggagaggaagctcaactttttgcca
cgcaagttccccagcctgcgggccgtgccggcctatggccgcttcatccaggaacgcttc
gagcgctgcctcgacctctacctgtgccctcggcagcgcaagatgagggtgaacgtggac
ccggaagacctcatcccaaaactgccgcagccgcgggacctgcagcctttccccacctgc
caggccctggtctacaagggtcacagtgacctcattcgctgccttagtgtctccccagag
ggccagtggctggcttcaggctctgacgatggctcggtgcggctctgggaggtggccact
gcccgctgcatgaggaccgtgcccgtggggggccgtggccgtgtaagtgcaaggcgcagg
gggcgccggggcagcgggcacagacctgagcctgacagcccgccgctcactcccgtctgc
agagaggactcagtgctgctcctgaacccagccctgggggaccggctggcggtgggcggc
acggatcagctgctgagtgcctttgtcgcccccgaggagcccgccgagcagcctgcccgc
tggctggaggcctccgaggaggagcggcgggagggcctgcggctgcgcatctgccacggg
aagccggtgacgcaggtgatctggcatgggcgcggggactacatggccgtggtgctggcc
gccgcgggccacacacaggtgctcatccaccagctgagccggcgccgcagccagagcccc
ttccgccggagccacgggcaggtgcagcgggtggccttccaccccgtgcggcccttcctg
ctcgtggcttcgcagcgcagcgtccgtgtctaccacctgctgcgccaggagctcaccaag
aagctgagacccaactgcaagtgggtgtccagcctggcggtgcaccctgcaggggacaac
atcatctgcggcagctacgacagcaagcttgtgtggtttgacctggacctctcctgtgag
ccctacagggtgctgcggcatcaccggaaggccctcagggccgtggccttccacacccgg
tacccactcttcgcctctggctcggatgacgggagtgtcatcgtctgccacgggatggtg
tataacgacctgctgcagaacccgctgctggtgcctgtgaaggtgctgcgggggcacacg
ctgacccgagacctgggggtcctggatgtggccttccaccccacccagccctggatcttc
tcctccggggccgatggcaccgtgcgcctcttcacctag
DBGET
integrated database retrieval system
