Canis lupus familiaris (dog): 100686835
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Entry
100686835 CDS
T01007
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a isoform X1
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03020
RNA polymerase
cfa03420
Nucleotide excision repair
cfa05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100686835 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
100686835 (POLR2J)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100686835 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
100686835 (POLR2J)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
100686835 (POLR2J)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100686835 (POLR2J)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100686835 (POLR2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
100686835
NCBI-ProteinID:
XP_003434782
Ensembl:
ENSCAFG00000013683
UniProt:
A0A8C0QLW5
A0A8I3RS88
LinkDB
All DBs
Position
6:9402443..9405898
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctcccgcctttgagtcgttcttgctcttcgagggcgaaaagaagattacc
attaacaaggacaccaaggtacccaatgcctgtttgtttaccatcaacaaagaagaccac
acactaggaaacatcatcaaatcacagctgctgaaggacccccaggtgctgtttgctggc
tacaaagtcccccaccccctggagcacaagatcatcattcgagtgcagaccacaccagac
tacagcccccaggaggccttcaccaacgccatcacagacctcatcagcgagctgtccctg
ctggaagagcgattccgggtggctattaaagacaagcaagaaggcatcgaatag
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