Canis lupus familiaris (dog): 100855608
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Entry
100855608 CDS
T01007
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X10
KO
K13210
far upstream element-binding protein
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
100855608 (FUBP1)
03041 Spliceosome [BR:
cfa03041
]
100855608 (FUBP1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100855608 (FUBP1)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100855608 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
100855608
NCBI-ProteinID:
XP_005622093
Ensembl:
ENSCAFG00000020361
LinkDB
All DBs
Position
6:71580919..71621261
Genome browser
AA seq
688 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
QAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGNYGDQQNPAP
AGQVDYTKAWEEYYKKMGQQGQTQDYSKAWEEYYKKQGQAVPAPTGAPPGGQPDYSAAWA
EYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcagactactcaacagtgcctccgccttcttctggctcagctggtggtggaggcggc
ggcggcggcggcggcggcgttaacgatgcgttcaaagatgcgctgcagagagcacggcag
attgcagcaaaaattggaggtgatgctggtacatcactgaattcaaatgactatggttat
gggggacaaaaaagacctttggaagacggagatggctcttggacaagtccgagcagtaca
acacactgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgct
cctcagaatgactcttttggaacacagttaccaccgatgcaccagcaacaaagcaggtct
gtaatgacagaagaatacaaagttccagatggaatggttggatttataattggcagaggt
ggtgaacagatctcacgcatacaacaggaatctggatgcaaaatacagatagctcctgat
agtggtggccttccagaaaggtcttgtatgttaactggaacacctgaatctgtccaatca
gcaaaacggttactggaccagattgttgaaaaaggaagaccagctccaggctttcaccat
ggtgatggaccgggaaatgcagttcaagaaatcatgattccagctagcaaggcaggatta
gttattggaaagggaggagaaactattaaacaacttcaggagcgggctggagttaaaatg
gttatgattcaagatgggcctcagaacactggtgctgacaaacctcttaggattacagga
gacccatacaaagttcagcaagccaaggaaatggtgttagagttaattcgtgatcaaggt
ggcttccgagaagttcgaaatgagtatgggtcaagaataggaggaaatgaagggatagat
gtccctattccaagatttgctgttggcattgtaataggaagaaatggagaaatgattaaa
aaaatacaaaatgatgctggtgttcgaattcagtttaagccagatgatggaacaacacct
gatagaatagcacaaataacaggacctccagaccgatgtcaacatgctgcagaaattatt
acagaccttcttcgaagtgttcaggctggtaatcctggtggtcctggacctggtggtcga
ggaagaggtagaggtcaaggcaactggaacatgggaccacctggtggattacaggaattt
aatttcattgtaccaactgggaaaactggactaataattggaaaaggaggtgaaaccata
aaaagcataagccaacagtctggtgcaagaatagaacttcagagaaatcctccacctaat
gcagatcctaatatgaaattatttacaattcgtggcactccacagcaaatagactatgcg
cggcaacttatagaagaaaagattggtggcccagtaaatcctttagggccacctgtaccc
catgggccccatggtgtcccaggcccccatgggcctcctgggcctccagggcctggaact
ccaatgggaccatacaaccctgcaccttacaatccaggaccacctggccctgctcctcat
ggtcctccggctccttatgctccccaggggtggggaaatgcatatccacactggcagcaa
caggcccctcctgatccagctaaggcaggaacggatccaaattcagcagcttgggctgcc
tattatgctcactattatcaacagcaagcacagccaccacctgcagctcctgctggtgca
ccaactacaacccaaaccaatggacaaggtaactatggagatcagcagaatccagctcca
gctggacaggttgattataccaaggcttgggaagagtattacaagaaaatgggtcaacaa
gggcagacacaagattattcaaaagcttgggaggaatattacaagaagcaaggtcaagca
gttcctgctcctactggtgctccaccaggtggtcagccagattatagtgcagcctgggct
gagtactatagacaacaagcagcctactatgcccagacaagtccccagggaatgccacag
catcctccagcacctcagggccaataa
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integrated database retrieval system
