Canis lupus familiaris (dog): 100855735
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Entry
100855735 CDS
T01007
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B isoform X2
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
100855735 (MEX3B)
04121 Ubiquitin system [BR:
cfa04121
]
100855735 (MEX3B)
Enzymes [BR:
cfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100855735 (MEX3B)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100855735 (MEX3B)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100855735 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
Prok-RING_4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100855735
NCBI-ProteinID:
XP_038339140
VGNC:
43184
LinkDB
All DBs
Position
3:58559422..58564198
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AA seq
1020 aa
AA seq
DB search
MARRVRVRCHSQFSELARRPRQARVPPLHARHPGARALTLLPQGASTGEPPPARPELAPR
PRQVPRGGRSAAAATWPHCPGRETAAPAALRSGPPAGRGGAESPGAPGTKERSARGAEGP
PAGWRRRGAERGGTGRRARALKASFLLSRSEAAPAGPARSPRAPRMPGRGAGRDGPAARA
RPRCPPEPWPASPRWRRGARARASARGGSAGARGECRAPAPRAPGVGGRGSWAVGRRGGG
GGRPRAAAAARLAQSQGRGRADRVPPAGRGARGAGLRARAPGAMRAGLCLCVACAPAQVG
NPRQEPLCPSATGPRVPLPASGRSDRPAGQTVAPPPSGTEGSRGGLFGDANGTFSGPFAS
GRPPAAELGASPGPRQAGEQSWGQAVLGRPGVGTQAGAPAATARRGPLRATQSSRRRERS
HGARGSRPASPPLTARFPAAFVAAASGRRAEGRRGRGAHGRAMPSSLAAAAAAAGGGETL
DDQRALQLALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCK
IKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALN
GAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVT
GMPENVDRAREEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKP
TPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTGGSAAATPRLADYSPPSPALSFA
HNGNNNNNGNGYTYAAGEAPVPSPDGCPELQPTFDPAPAPPPGAPLLWAQFERSPGGGPA
APASSSCSSSASSSASSSSVVFPGGGAGAPSNANLGLLVHRRLHPGASCPRLSPPLHMAP
GAGEHHLARRVRSDPGGGGLTYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSG
LRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcgcgttcgcgtccgctgtcacagtcagttctccgaactcgcgaggcggcca
cggcaggcacgagttcccccacttcacgctcggcaccccggagcccgggcgctcacgctc
ctcccgcaaggagcgagcaccggggagcctccgcccgcgcgccccgagctcgccccgcgg
ccccgccaggtcccccgagggggccggtccgcggcggcggccacatggccccattgtccc
gggcgggaaaccgcagccccggccgccctgcggagcggcccgccggccgggcgcgggggc
gcggagagcccgggggcgccgggaacaaaggagaggagcgcgcgcggggccgaggggcca
ccggccgggtggcggcgccgcggggccgagcgcggggggacggggcggcgggcccgggcc
ctcaaagcctcctttcttctctcgcgctcggaggcggccccggcagggcccgcccgttcc
ccgcgcgcaccgcgcatgcccggccgcggggcggggagggacgggccggcggcgcgcgca
cgccctcgctgcccgccggagccatggccggcgtccccgcggtggcggcgcggcgctcgt
gcacgtgccagcgcccgcgggggctcggccggcgcgcggggcgagtgcagggcccccgcg
ccgcgcgctccgggggtcgggggtcgcgggtcgtgggccgtgggccgcaggggcgggggg
ggtgggcggccccgcgccgcggcggctgcccggctggcccagtcgcagggtcggggccgg
gcggaccgagtgccgcccgcggggcgcggggcgcggggcgcggggctgcgggcgcgcgcg
ccgggagcgatgcgggcgggcctgtgcctttgtgtcgcctgcgctcccgcgcaggtgggc
aacccgcgccaggagccgctgtgtccgagcgcaacgggacctcgagtcccactccccgcg
tccggccgctcggaccgccctgcggggcagacagtagcccctcctcccagcggcaccgag
ggctcccggggcggtctatttggagacgctaacgggactttctcaggaccgttcgcttcg
ggccggccgccggccgcagagttgggcgcgtcccctggtccccgtcaggcgggggagcag
agctggggacaggccgtcctcggccgacctggggtggggacccaggcgggggctcccgcg
gccactgcccggcgcggaccgctccgagcgacccagtcctcccggcgccgagaaaggagc
cacggagcccgcggcagccggccggcctccccgcccctgaccgctcgcttcccggctgcc
tttgtggccgcagcttctggccgccgagccgagggccggcgggggcgcggcgcgcacggc
cgagcgatgcccagctccctggcggcggcggcggcggcggcgggcggcggcgagaccctg
gatgaccaaagagccctgcagctcgcgctcgaccagctctccctgctggggctggacagt
gacgagggcgcctctctgtacgacagcgagccgcgcaagaagagcgtgaacatgaccgag
tgcgtaccggtgcccagttccgagcacgtcgccgagatcgtggggcgccaaggttgtaaa
atcaaagcgctgcgggcgaagaccaatacttacatcaagaccccggttcgcggggaggag
cctgtctttgttgtgacgggcaggaaggaggatgtggccatggctcggagagagatcatc
tctgcggcggagcacttctccatgatccgcgcctcgcggaataagaacacggcgctcaac
ggcgcagtgcccgggccgcccaacctgccgggacagaccaccatccaggtgcgggtgccc
taccgcgtggtggggctcgtggtggggcccaagggcgcgaccatcaagcgcatccaacaa
cagacgcacacgtacatcgtgacgcccagccgcgacaaggagccggtgttcgaggtgacc
ggcatgcccgagaacgtggaccgggctcgcgaggaaatagaggcgcatatcgccctgcgc
accggcggcatcattgagctcacagacgaaaacgactttcacgccaacggcacggacgtg
ggcttcgatctgcaccacgggtccggcgggtccggccccggcagcctctggagcaagccc
acccccagcatcacgcccacccccggccgcaagcctttctccagctaccgcaacgacagc
tccagctcgctcggcagcgcctccacagactcttacttcggcggggggaccggcggcagc
gcagccgccaccccgcgcctggcggactacagcccccccagccccgcgctcagcttcgcg
cacaacggcaacaacaacaacaacggcaacggatacacgtacgcggcgggggaggccccc
gtgccttcccccgacggctgcccggagctgcagcccaccttcgacccggctcccgctccc
ccgcccggggcgcccctgctctgggcgcagttcgagcgctcccctggcggcggccccgcg
gcgcccgcgtcctcgtcctgctcttcgtccgcgtcttcgtccgcgtcgtcctcctccgtg
gtcttccccgggggcggcgccggcgcgccctccaatgccaacctggggctgctggtgcac
cggcggctgcacccgggcgccagctgcccgcgcctgtccccgcccctgcacatggccccg
ggggcgggcgagcaccacctggcccgccgcgtgcgcagcgacccgggcggcgggggcctg
acctacgccgcctatgccaacgggctgggggcgcagctgcccgggctgcagccgtcggac
acctcgggctcctcgtcgtcgtccagctcctcctccagctcctcctcctcgtcgtcgggg
ttgcggcggaagggcagccgcgactgctccgtgtgcttcgagagcgaggtgatcgccgcg
ctggtgccctgcggccacaacctcttctgcatggagtgcgccaaccgcatctgcgagaag
agcgagcccgagtgccccgtgtgccacaccgcggtcactcaggccatccgcatcttttcc
tga
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