Canis lupus familiaris (dog): 100855872
Help
Entry
100855872 CDS
T01007
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04625
C-type lectin receptor signaling pathway
cfa04668
TNF signaling pathway
cfa04917
Prolactin signaling pathway
cfa05133
Pertussis
cfa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100855872 (IRF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100855872 (IRF1)
09152 Endocrine system
04917 Prolactin signaling pathway
100855872 (IRF1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100855872 (IRF1)
09171 Infectious disease: bacterial
05133 Pertussis
100855872 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
100855872 (IRF1)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100855872 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
100855872
NCBI-ProteinID:
XP_003639416
VGNC:
42091
LinkDB
All DBs
Position
11:complement(19575525..19582746)
Genome browser
AA seq
321 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDAKSKAKRKSCGDSSPDTFSDGLSTSTLPDDHSSYTAHGYMGQDLEVERDL
TPALSPCAVTSTLPDWHIPEIVPDSTSDLYSFQVSPMPSTSEATTDEDEEGKLTEDIMKL
LEQTGWQPTNVDGKGYLLNEPGTQPPSLYGDFSCKDEPEVDSPGGYVGLISSDLKNMDTS
WLDSLLTPVRLPSIQAIPCAP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccctggctagagatgcagattaattccaaccaa
atcccagggctgatctggattaataaagaggagatgattttccagattccatggaagcat
gctgccaagcatggctgggacatcaacaaggatgcctgtctgttccggagctgggctatt
cacacaggtcgatacaaagccggggaaaaggagccagatcctaagacatggaaggccaac
tttcgctgtgccatgaactccctgccagatattgaggaagtgaaggaccagagcaggaac
aaaggcagctcagctgtgcgggtgtaccggatgctcccacccctcaccaagaaccagaga
aaagagagaaagtccaagtccagccgagatgctaagagcaaggccaagaggaagtcatgt
ggtgactccagtcctgacaccttctctgatggactcagcacctccaccctgcccgatgac
cacagcagctacacagctcacggctacatggggcaggatttggaggttgagcgggacctt
actccagcattgtcaccgtgtgccgttaccagtactctccctgactggcacatcccagag
atagtgccggacagcaccagtgacctctacagcttccaggtgtcacctatgccctccact
tctgaagccacaacagatgaggacgaagaagggaaattaactgaggacatcatgaagctc
ttggagcagacggggtggcagccgacaaacgtggatggcaaggggtacctgctaaatgaa
cctgggactcagcccccctctctctatggagacttcagctgcaaggacgaaccagaagtt
gacagccctggggggtatgttgggctgatctcttcagatctgaagaacatggacaccagc
tggctggacagcctgttgactccagtcagactgccctccatccaggccattccttgtgca
ccatag
DBGET
integrated database retrieval system